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Updated: Jun 13, 2025

Monitoring Stub1-Mediated Pexophagy
Published on: May 12, 2023
PEX1G843D remains functional in peroxisome biogenesis but is rapidly degraded by the proteasome
Connor J Sheedy1, Soham P Chowdhury2, Bashir A Ali3
1Biomolecular Science and Engineering Program, University of California, Santa Barbara, Santa Barbara, California, USA.
Insights
The common PEX1 G843D mutation causes rapid degradation of the PEX1/PEX6 AAA-ATPase, disrupting peroxisome import. Stabilizing PEX1 offers a potential therapy for peroxisome biogenesis disorders.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- Peroxisome biogenesis disorders (PBDs) are severe genetic diseases caused by defects in peroxisome assembly.
- Mutations in PEX1 and PEX6, which encode AAA-ATPases essential for peroxisomal matrix protein import, are the most frequent cause of PBDs.
- The HsPEX1G843D mutation is the most common PEX1 pathogenic allele, leading to reduced protein import.
Purpose of the Study:
- To investigate the molecular mechanisms underlying the HsPEX1G843D mutation's impact on peroxisome biogenesis.
- To explore the role of PEX1/PEX6 assembly and stability in PBDs.
- To assess the therapeutic potential of protein stabilization for PEX1-related PBDs.
Main Methods:
- Comparative analysis of yeast (ScPex1G700D) and human (HsPEX1G843D) PEX1 mutants.
- In vitro studies of ATPase activity and Pex1/Pex6 assembly.
- Generation and analysis of human cell lines expressing HsPEX1G843D.
- Investigation of protein degradation pathways (proteasome).
- Functional studies involving deubiquitinase fusion to PEX1G843D.
Main Results:
- The yeast ScPex1G700D mutant showed reduced stability and impaired Pex6 assembly but retained ATPase activity, with only minor in vivo import defects.
- Human HsPEX1G843D was rapidly degraded by the proteasome in cell lines, but overexpression could restore peroxisome import.
- The G843D mutation decreased PEX1's affinity for PEX6, and impaired assembly induced degradation of wild-type PEX1.
- Fusing a deubiquitinase to PEX1G843D reduced its degradation in mammalian cells.
Conclusions:
- The PEX1 G843D mutation destabilizes the PEX1/PEX6 complex, leading to PEX1 degradation and impaired peroxisome function.
- Impaired PEX1/PEX6 assembly is a key factor triggering PEX1 degradation.
- Stabilizing PEX1 protein presents a promising therapeutic strategy for PBDs caused by PEX1 hypomorphic mutations.
Abstract:
The PEX1/PEX6 AAA-ATPase is required for the biogenesis and maintenance of peroxisomes. Mutations in HsPEX1 and HsPEX6 disrupt peroxisomal matrix protein import and are the leading cause of peroxisome biogenesis disorders. The most common disease-causing mutation in PEX1 is the HsPEX1G843D allele, which results in a reduction of peroxisomal protein import. Here, we demonstrate that the homologous yeast mutant, ScPex1G700D, reduces the stability of Pex1's active D2 ATPase domain and impairs assembly with Pex6 in vitro, but can still form an active AAA-ATPase motor. In vivo, ScPex1G700D exhibits only a slight defect in peroxisome import. We generated model human HsPEX1G843D cell lines and show that PEX1G843D is rapidly degraded by the proteasome, but that induced overexpression of PEX1G843D can restore peroxisome import. Additionally, we found that the G843D mutation reduces PEX1's affinity for PEX6, and that impaired assembly is sufficient to induce degradation of PEX1WT. Lastly, we found that fusing a deubiquitinase to PEX1G843D significantly hinders its degradation in mammalian cells. Altogether, our findings suggest a novel regulatory mechanism for PEX1/PEX6 hexamer assembly and highlight the potential of protein stabilization as a therapeutic strategy for peroxisome biogenesis disorders arising from the G843D mutation and other PEX1 hypomorphs.
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