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Developing a Computable Phenotype for Identifying Children, Adolescents, and Young Adults With Diabetes Using
Hui Shao1, Lorna E Thorpe2, Shahidul Islam3,4
1Hubert Department of Global Health, Emory Rollins School of Public Health, Emory University, Atlanta, GA.
Insights
The Diabetes in Children, Adolescents, and Young Adults (DiCAYA) network developed a computable phenotype (CP) to identify diabetes cases using electronic health records (EHRs). This new CP accurately detects diabetes and type 1 diabetes in youth and young adults.
Area of Science:
- Diabetes research
- Public health surveillance
- Health informatics
Background:
- The Diabetes in Children, Adolescents, and Young Adults (DiCAYA) network aims to establish a national electronic health record (EHR)-based surveillance system for diabetes.
- Accurate identification of prevalent diabetes cases is crucial for effective public health monitoring and intervention.
Purpose of the Study:
- To develop and validate a DiCAYA-wide EHR-based computable phenotype (CP) for identifying prevalent diabetes cases in youth and young adults.
- To assess the accuracy of the CP in identifying diabetes and its subtypes (Type 1 and Type 2 Diabetes).
Main Methods:
- Conducted network-wide chart reviews of 2,134 youth and 2,466 young adults with suspected diabetes.
- Developed and compared three alternative CPs, using chart review diagnoses as the gold standard.
- Evaluated CP performance using sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV).
Main Results:
- The final DiCAYA CP requires at least one diabetes diagnosis code and uses diagnostic code ratios for subtype classification.
- The CP demonstrated >90% sensitivity, specificity, PPV, and NPV for overall diabetes detection in both age groups (with slightly lower metrics for young adults).
- The CP achieved >90% accuracy for Type 1 Diabetes (T1D) classification and >80% for Type 2 Diabetes (T2D) identification.
Conclusions:
- The DiCAYA CP is effective for identifying overall diabetes and T1D in youth and young adults.
- Refinements are needed for T2D misclassification in youth.
- The CP's simplicity facilitates widespread implementation across various EHR systems for enhanced diabetes surveillance.
Objective:
The Diabetes in Children, Adolescents, and Young Adults (DiCAYA) network seeks to create a nationwide electronic health record (EHR)-based diabetes surveillance system. This study aimed to develop a DiCAYA-wide EHR-based computable phenotype (CP) to identify prevalent cases of diabetes.
Research Design And Methods:
We conducted network-wide chart reviews of 2,134 youth (aged <18 years) and 2,466 young adults (aged 18 to <45 years) among people with possible diabetes. Within this population, we compared the performance of three alternative CPs, using diabetes diagnoses determined by chart review as the gold standard. CPs were evaluated based on their accuracy in identifying diabetes and its subtype.
Results:
The final DiCAYA CP requires at least one diabetes diagnosis code from clinical encounters. Subsequently, diabetes type classification was based on the ratio of type 1 diabetes (T1D) or type 2 diabetes (T2D) diagnosis codes in the EHR. For both youth and young adults, the sensitivity, specificity, and positive and negative predictive values (PPV and NPV, respectively) in finding diabetes cases were >90%, except for the specificity and NPV in young adults, which were slightly lower at 83.8% and 80.6%, respectively. The final DiCAYA CP achieved >90% sensitivity, specificity, PPV, and NPV in classifying T1D, and demonstrated lower but robust performance in identifying T2D, consistently maintaining >80% across metrics.
Conclusions:
The DiCAYA CP effectively identifies overall diabetes and T1D in youth and young adults, though T2D misclassification in youth highlights areas for refinement. The simplicity of the DiCAYA CP enables broad deployment across diverse EHR systems for diabetes surveillance.
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