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Updated: May 16, 2025

Methods for Evaluating the Role of c-Fos and Dusp1 in Oncogene Dependence
Published on: January 7, 2019
A Bivalent Molecular Glue Linking Lysine Acetyltransferases to Oncogene-induced Cell Death
Meredith N Nix1,2, Sai Gourisankar1, Roman C Sarott1
1Department of Chemical and Systems Biology, Stanford University, Stanford, CA, USA.
Abstract:
Developing cancer therapies that induce robust death of the malignant cell is critical to prevent relapse. Highly effective strategies, such as immunotherapy, exemplify this observation. Here we provide the structural and molecular underpinnings for an approach that leverages chemical induced proximity to produce specific cell killing of diffuse large B cell lymphoma, the most common non-Hodgkin's lymphoma. We develop KAT-TCIPs (lysine acetyltransferase transcriptional/epigenetic chemical inducers of proximity) that redirect p300 and CBP to activate programmed cell death genes normally repressed by the oncogenic driver, BCL6. Acute treatment rapidly reprograms the epigenome to initiate apoptosis and repress c-MYC. The crystal structure of the chemically induced p300-BCL6 complex reveals how chance interactions between the two proteins can be systematically exploited to produce the exquisite potency and selectivity of KAT-TCIPs. Thus, the malignant function of an oncogenic driver can be co-opted to activate robust cell death, with implications for precision epigenetic therapies.
Insights
Researchers developed novel chemical inducers of proximity (KAT-TCIPs) to target diffuse large B cell lymphoma. These compounds activate cell death genes by redirecting epigenetic modifiers, offering a new precision epigenetic therapy approach.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Robust cancer cell death is crucial for preventing relapse in therapies like immunotherapy.
- Diffuse large B cell lymphoma (DLBCL) is the most common non-Hodgkin's lymphoma, necessitating targeted treatment strategies.
Purpose of the Study:
- To provide structural and molecular insights into a novel approach for specific cell killing in DLBCL using chemical induced proximity.
- To develop and characterize KAT-TCIPs (lysine acetyltransferase transcriptional/epigenetic chemical inducers of proximity) for targeted cancer therapy.
Main Methods:
- Development of KAT-TCIPs to redirect p300 and CBP.
- Activation of programmed cell death genes repressed by the oncogenic driver BCL6.
- Structural analysis via crystal structure of the p300-BCL6 complex.
Main Results:
- KAT-TCIPs reprogram the epigenome to initiate apoptosis and repress c-MYC upon acute treatment.
- The crystal structure elucidated how specific protein interactions can be exploited for potent and selective therapeutic effects.
- Demonstrated co-option of oncogenic driver function to activate cell death.
Conclusions:
- This study provides the foundation for precision epigenetic therapies targeting DLBCL.
- The developed KAT-TCIPs offer a novel strategy for inducing robust cancer cell death by manipulating epigenetic regulators.
- Exploiting oncogenic drivers for therapeutic benefit represents a promising avenue in cancer treatment.
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