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Accelerating high-concentration monoclonal antibody development with large-scale viscosity data and ensemble deep

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Summary

Researchers developed DeepViscosity, an artificial intelligence model, to predict antibody viscosity. This tool aids in selecting low-viscosity monoclonal antibodies (mAbs) for subcutaneous injections, improving drug development and delivery.

Keywords:
Antibody viscosityensemble deep learninghigh-concentration formulationsmonoclonal antibodies

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Area of Science:

  • Biotechnology
  • Computational Biology
  • Pharmaceutical Sciences

Background:

  • High viscosity in concentrated antibody solutions hinders subcutaneous injection development.
  • Existing computational models lack generalizability due to limited training data.

Purpose of the Study:

  • To develop accurate predictive models for screening monoclonal antibody (mAb) viscosity at high concentrations.
  • To create a tool that facilitates the selection of low-viscosity mAbs for improved drug development and administration.

Main Methods:

  • Measured viscosity for 229 monoclonal antibodies (mAbs).
  • Developed DeepViscosity, an ensemble of 102 artificial neural network models.
  • Utilized 30 sequence-based features from a DeepSP model for prediction.
  • Classified mAbs as low-viscosity (≤20 cP) or high-viscosity (>20 cP) at 150 mg/mL.

Main Results:

  • DeepViscosity achieved 87.5% and 89.5% accuracy on two independent test sets.
  • The model demonstrated superior performance compared to other predictive methods.
  • Successfully predicted viscosity for a large panel of 229 mAbs.

Conclusions:

  • DeepViscosity enables early-stage selection of low-viscosity mAbs.
  • Facilitates improved manufacturability and formulation properties for subcutaneous drug delivery.
  • Provides a webserver application for accessible use in antibody development.