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Cancer Specific CAIX-Targeting Supramolecular Lysosome-Targeting Chimeras (Supra-LYTAC) for Targeted Protein
Dohyun Kim1, Gyeongseok Yang1, Chaelyeong Lim1
1Chemistry Department, Ulsan National Institute of Science and Technology (UNIST), 50, UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919, Republic of Korea.
Abstract:
Recently, targeted protein degradation (TPD) strategies have emerged as a promising solution to tackle undruggable proteins. While most TPD strategies target intracellular proteins, limited options exist for targeting extracellular or membrane proteins. Herein, cancer specific carbonic anhydrase IX (CAIX)-targeting supramolecular nanofibrous lysosome-targeting chimeras (Supra-LYTAC) is reported. Two self-assembling amphiphilic peptides are synthesized: one that interacts with the protein of interest (POI), and another that mediates lysosomal endocytosis by targeting a cancer-specific enzyme. Notably, these two peptides co-assemble into nanofibers capable of targeting cancer cells in a spatiotemporal manner. Through dynamic and multivalent binding, a ternary complex form (supramolecular chimeric nanostructure; CAIX-nanofiber-POI), which undergoes internalization into lysosomes where the POI is degraded through lysosomal catalytic activity. This study demonstrates the potential of supramolecular approaches to expand the scope of LYTAC technology, offering new opportunities for designing TPD strategies in the future.
Insights
New supramolecular nanofibrous lysosome-targeting chimeras (Supra-LYTAC) target extracellular cancer proteins. This approach expands targeted protein degradation (TPD) for previously undruggable targets.
Area of Science:
- Biochemistry
- Nanotechnology
- Oncology
Background:
- Targeted protein degradation (TPD) offers a novel therapeutic strategy for diseases.
- Current TPD methods primarily focus on intracellular targets, leaving extracellular and membrane proteins largely undruggable.
- Developing new modalities to target these extracellular proteins is crucial for expanding TPD applications.
Purpose of the Study:
- To develop a novel supramolecular approach for targeted degradation of extracellular cancer proteins.
- To engineer lysosome-targeting chimeras (LYTACs) capable of targeting cancer-specific membrane proteins.
- To demonstrate the efficacy of a supramolecular strategy for enhancing TPD scope.
Main Methods:
- Synthesis of two self-assembling amphiphilic peptides: one for protein of interest (POI) interaction, another for lysosomal endocytosis via a cancer-specific enzyme.
- Co-assembly of peptides into supramolecular nanofibers.
- Development of cancer-specific carbonic anhydrase IX (CAIX)-targeting Supra-LYTACs.
- Demonstration of ternary complex formation and lysosomal internalization for POI degradation.
Main Results:
- Successful co-assembly of peptides into nanofibers capable of spatiotemporal cancer cell targeting.
- Formation of a ternary complex (supramolecular chimeric nanostructure) facilitating targeted delivery.
- Internalization into lysosomes and subsequent degradation of the targeted protein of interest (POI) via lysosomal activity.
- Demonstrated potential for targeting extracellular proteins, specifically CAIX on cancer cells.
Conclusions:
- Supramolecular approaches can effectively expand the capabilities of LYTAC technology.
- The developed Supra-LYTACs offer a promising strategy for targeting and degrading extracellular proteins.
- This work opens new avenues for designing innovative TPD strategies against challenging cancer targets.
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