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Published on: August 1, 2019
Creating a Proxy for Baseline Eastern Cooperative Oncology Group Performance Status in Electronic Health Records for
Michael Johnson1, Peining Tao1, Mehmet Burcu1,2
1Biostatistics and Research Decision Sciences, Merck & Co, Inc, Rahway, NJ.
This study introduces a novel method to accurately impute missing Eastern Cooperative Oncology Group performance status (ECOG PS) in electronic health records. This approach ensures imputed ECOG PS aligns with known values, improving cancer research accuracy.
Area of Science:
- Oncology
- Health Informatics
- Biostatistics
Background:
- Eastern Cooperative Oncology Group performance status (ECOG PS) is crucial for cancer research but often missing in electronic health records (EHRs).
- Incomplete ECOG PS data can bias comparative effectiveness research by introducing survival differences between patients with known and imputed data.
- Existing imputation methods may not adequately preserve clinical outcomes, complicating research.
Purpose of the Study:
- To develop and validate a novel imputation method for missing ECOG PS in advanced non-small cell lung cancer (aNSCLC) patients.
- To ensure that patients with imputed ECOG PS are indistinguishable from those with known ECOG PS in terms of survival outcomes.
- To reduce potential biases in comparative effectiveness research stemming from incomplete ECOG PS data.
Main Methods:
- Utilized a deidentified EHR database of aNSCLC patients undergoing first-line treatment.
- Employed a novel imputation strategy involving sample-splitting, predictive modeling, and an optimal threshold determined by clinical outcomes.
- Validated the approach using classification metrics and by comparing survival metrics between observed and imputed ECOG PS.
Main Results:
- 21% of 62,101 patients had missing ECOG PS at baseline.
- The novel imputation method demonstrated comparable or superior accuracy (73.3%), sensitivity (42.4%), and specificity (81%) versus other techniques.
- Achieved minimal survival metric differences: 0.07 hazard ratio, -0.36 months median survival for good ECOG PS (<2), and -0.39 months for poor ECOG PS (≥2).
Conclusions:
- The developed imputation method effectively aligns clinical outcomes, enhancing the utility of EHR data for aNSCLC research.
- This approach improves the reliability of comparative effectiveness studies by minimizing bias from missing ECOG PS data.
- The method offers a robust solution for leveraging real-world data in oncology research.
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