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Published on: April 24, 2018
Solid-state calculations for iterative refinement in quantum crystallography using the multipole model.
Michael Patzer1, Christian W Lehmann1
1Chemische Kristallographie und Elektronenmikroskopie, Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, Mülheim an der Ruhr, 45470 North Rhine-Westphalia, Germany.
A new quantum crystallographic method uses theoretical multipole parameters from solid-state calculations for accurate electron density refinement. This approach, implemented in ReCrystal, improves hydrogen atom positioning in molecular crystals.
Area of Science:
- Quantum Crystallography
- Solid-State Chemistry
- Computational Materials Science
Background:
- Accurate electron density description is crucial for understanding chemical bonding and intermolecular interactions.
- Existing methods like Hirshfeld atom refinement (HAR) have limitations, particularly with gas-phase approximations.
- Transferable form factor approaches offer potential but require careful implementation.
Purpose of the Study:
- To develop and validate a novel quantum crystallographic refinement methodology.
- To utilize theoretical multipole parameters directly from solid-state calculations.
- To improve the accuracy of electron density refinement and hydrogen atom positioning in molecular crystals.
Main Methods:
- Development of the Python3 code ReCrystal for iterative refinement.
- Generation of theoretical multipole parameters using CRYSTAL17 and the XD program.
- Application of the method to molecular crystals of D/L-serine and xylitol.
Main Results:
- The ReCrystal method provides refinement comparable to existing transferable form factor approaches.
- Accurate determination of hydrogen atom positions in xylitol, showing good agreement with neutron diffraction data.
- Demonstrated the effectiveness of periodic boundary conditions in ReCrystal for molecular crystal refinement.
Conclusions:
- The developed methodology offers a robust alternative for charge density studies, particularly focusing on weak interactions.
- ReCrystal allows for multipole parameters derived from high-resolution calculated diffraction data without database dependency.
- This approach effectively separates model and experimental errors, enhancing refinement reliability.
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