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Updated: Jun 12, 2025

Analysis of Group IV Viral SSHHPS Using In Vitro and In Silico Methods
Published on: December 21, 2019
Structure-function insights into the dual role of African swine fever virus pB318L: A typical
Hai-Fan Zhao1, Ying Wang2, Xiao-Hong Liu3
1School of Life Sciences, University of Science and Technology of China, Hefei 230027, China; Beijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, China.
Abstract:
African swine fever virus (ASFV) pB318L is an important protein for viral replication that acts as a membrane-bound trans-geranylgeranyl-diphosphate synthase (GGPPS) catalyzing the condensation of isopentenyl diphosphate (IPP) with allylic diphosphates. Recently we solved the crystal structure pB318L lacking N-terminal transmembrane region and performed a preliminary structural analysis. In this study, structure-based mutagenesis study and geranylgeranyl pyrophosphate (GGPP) production assay further revealed the key residues for the GGPPS activity. Structural comparison showed pB318L displays a strong similarity to typical GGPPSs instead of protein prenyltransferases. The phylogenetic analysis indicated pB318L may share a common ancestor with the GGPPSs from Brassicaceae plants rather than from its natural host. The subcellular localization analysis showed pB318L is localized in both nucleus and cytoplasm (including the endoplasmic reticulum membrane and mitochondria outer membrane). A unique N-terminal nuclear localization signal (NLS) following the transmembrane region was discovered in pB318L and the NLS was confirmed to be required for the nuclear import. We further revealed the NLS plays an essential role in the interaction with nuclear transporter karyopherin subunit alpha 1 (KPNA1). Their interaction may suppress signal transducers and activators of transcription 1 (STAT1) translocation and subsequently competitively inhibit nuclear import of IFN-stimulated gene factor 3 (ISGF3) complex. Our biochemical, structural and cellular analyses provide novel insights to pB318L that acts as an essential GGPPS that promotes viral replication and as a nuclear import protein that may be involved in immune evasion of ASFV.
Insights
African swine fever virus protein pB318L functions as a geranylgeranyl-diphosphate synthase (GGPPS) crucial for viral replication. It also acts as a nuclear import protein, potentially aiding ASFV immune evasion.
Area of Science:
- Virology
- Molecular Biology
- Biochemistry
Background:
- African swine fever virus (ASFV) protein pB318L is vital for viral replication.
- pB318L functions as a membrane-bound trans-geranylgeranyl-diphosphate synthase (GGPPS).
Purpose of the Study:
- To elucidate the enzymatic activity and structural characteristics of ASFV pB318L.
- To investigate the role of pB318L in viral replication and potential immune evasion mechanisms.
Main Methods:
- Structure-based mutagenesis and geranylgeranyl pyrophosphate (GGPP) production assays.
- Phylogenetic analysis and subcellular localization studies.
- Investigation of nuclear import pathways and protein-protein interactions.
Main Results:
- Key residues for pB318L's GGPPS activity were identified.
- pB318L shares structural and phylogenetic similarities with plant GGPPSs.
- A unique N-terminal nuclear localization signal (NLS) in pB318L mediates nuclear import and interacts with KPNA1, potentially inhibiting STAT1 and ISGF3 translocation.
Conclusions:
- ASFV pB318L is an essential GGPPS promoting viral replication.
- pB318L functions as a nuclear import protein involved in ASFV immune evasion by interfering with host nuclear transport pathways.
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