How Transcriptional Bursting and mRNA Production Affect Precise Timing of Cell Lysis Phenomena
Zhuoyan Lyu1, Anupam Mondal1,2, Anatoly B Kolomeisky1,2,3,4
1Department of Chemistry, Rice University, Houston, Texas 77005, United States.
Abstract:
Bacterial viruses infect bacterial cells and stimulate the production of holin proteins that accumulate in the cellular membranes. When the number of such proteins reaches a threshold, the membrane permeabilizes and the cell is destroyed in the process known as cell lysis. Experimental studies indicate that cell lysis occurs at specific times, although the underlying molecular mechanisms of such precise timing remain not well understood. Recently, a theoretical framework has been introduced to explain these phenomena as a coupling between stochastic processes of holins accumulation in the membrane and breaking the membrane that leads to threshold behavior. However, this approach does not account for many biologically important processes in cell lysis. In this work, we investigated the role of transcriptional bursting and mRNA production on the dynamics of cell lysis. The original stochastic framework is extended, allowing us to evaluate the cell lysis dynamics under more realistic biological conditions using analytical calculations and Monte Carlo computer simulations. It is shown explicitly that the random processes of transcription bursting and mRNA production do not affect the threshold-like dynamics of cell lysis, although they influence the absolute values of the maximal thresholds and their distributions. It is also found that the effect of mRNA production is generally stronger than the effect due to transcriptional bursting. Physical-chemical arguments to explain these observations are presented. Thus, our theoretical analysis suggests that the precise timing of cell lysis is a robust phenomenon despite involving multiple random biochemical processes. Our theoretical approach clarifies some important mechanistic aspects of complex biological processes of cell lysis.
Insights
Bacterial cell lysis timing is robust, even with random gene expression. New models show transcriptional bursting and mRNA production influence lysis thresholds but not the precise timing mechanism.
Area of Science:
- Microbiology
- Molecular Biology
- Theoretical Biology
Background:
- Bacterial viruses induce holin protein production, leading to cell membrane permeabilization and lysis.
- Precise timing of bacterial cell lysis is observed, but underlying molecular mechanisms remain unclear.
- Existing models explain lysis timing via holin accumulation and membrane breaking but lack biological realism.
Purpose of the Study:
- To investigate the impact of transcriptional bursting and mRNA production on bacterial cell lysis dynamics.
- To extend existing stochastic frameworks for cell lysis to incorporate realistic biological processes.
- To elucidate the mechanistic aspects of precise cell lysis timing in bacteria.
Main Methods:
- Developed an extended stochastic theoretical framework for cell lysis.
- Incorporated transcriptional bursting and mRNA production into the model.
- Performed analytical calculations and Monte Carlo computer simulations.
Main Results:
- Transcriptional bursting and mRNA production do not alter the threshold-like dynamics of cell lysis.
- These stochastic processes influence the maximal thresholds and their distributions.
- mRNA production generally has a stronger effect on lysis dynamics than transcriptional bursting.
Conclusions:
- Precise cell lysis timing is a robust phenomenon, resilient to random biochemical processes.
- The extended theoretical model clarifies mechanistic aspects of bacterial cell lysis.
- The study provides physical-chemical explanations for the observed lysis dynamics.
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