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Modeling a Continuously Operating Electrospray Ionization Emitter Using Molecular Dynamics Simulations: From Bulk
Mahsa Dolatkhah Ouch Bolagh1, Lars Konermann1
1Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada.
The Journal of Physical Chemistry. B
|April 10, 2025
Summary
This study introduces a new molecular dynamics simulation method for continuous electrospray ionization (ESI) analysis. This approach enables detailed investigation of the entire ESI process, from solution to gas-phase ions, significantly reducing computational time.
Area of Science:
- Analytical Chemistry
- Physical Chemistry
- Computational Chemistry
Background:
- Electrospray ionization (ESI) is crucial for mass spectrometry (MS) analysis, converting solution species into gas-phase ions.
- However, the detailed mechanisms of ESI, particularly droplet formation and ion release, remain incompletely understood.
- Existing molecular dynamics (MD) simulations of ESI have been limited to finite solution volumes, restricting analysis to short bursts.
Purpose of the Study:
- To develop and validate a novel MD algorithm for simulating continuous electrospray ionization (ESI) from an emitter capillary.
- To enable sustained, long-term MD simulations of the entire ESI process, overcoming previous computational limitations.
- To provide unprecedented insights into the physics of the Taylor cone and nascent droplet behavior during ESI.
Main Methods:
- Development of a new MD algorithm combining trajectory stitching with "solution recycling" for continuous simulation.
- Implementation of a method to periodically remove ejected droplets and replenish the emitter with fresh solution.
- Simulation of aqueous NaCl solution ESI from an emitter capillary over 50 ns.
Main Results:
- The novel algorithm enables continuous MD-based ESI simulations, a significant advancement over previous methods.
- Computational efficiency was dramatically improved, reducing an estimated 5000 days of wall clock time to 20 days for a 50 ns simulation.
- Detailed insights into the Taylor cone dynamics and the behavior of newly formed ESI droplets were obtained.
Conclusions:
- The developed MD approach provides the first comprehensive, continuous simulation of the entire ESI process.
- This method significantly enhances the feasibility of detailed mechanistic studies in ESI-MS.
- The findings offer a deeper understanding of ESI fundamental processes, from solution to ion generation.
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