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Published on: June 3, 2017
Network expression analysis identifies and experimentally validates the involvement of Fosb in acute kidney injury
Xiaoyan Tang1,2, Changqiong Shen3, Chunqiu Liu1
1Department of Nephrology Chongqing University Three Gorges Hospital Chongqing China.
Abstract:
Acute kidney injury (AKI) is a complex clinical syndrome associated with increased incidence and mortality rates among critically ill patients, often leading to multiple organ dysfunction, which underscores the need to better understand its molecular mechanisms. In this study, common differentially expressed genes (DEGs) between various AKI models and control groups were extracted using the Gene Expression Omnibus (GEO) database, followed by an exploration of potential signaling pathways involved in AKI. Key genes in the development of AKI were identified through Weighted Gene Co-expression Network Analysis (WGCNA) and protein-protein interaction (PPI) networks, and the expression of hub genes was validated using quantitative PCR (qPCR), Western blotting, immunohistochemistry (IHC) and flow cytometry. A total of 1265 DEGs significantly associated with AKI were identified, with GO and KEGG analyses revealing significant enrichment in pathways related to kidney development, muscle regulation, and amino acid biosynthesis. WGCNA further screened AKI-related modules, identifying 290 DEGs significantly linked to the disease state. PPI network analysis revealed Fosb as a significantly upregulated hub gene in AKI, with experimental validation demonstrating its substantial upregulation in patients with acute tubular necrosis (ATN), HR-induced HK-2 cells injury and ischemia-reperfusion injury (IRI) mice. Inhibition of Fosb alleviated hypoxia-reoxygenation (HR)-induced apoptosis and inflammation in HK-2 cells by suppressing the AP-1 complex (Fosb/C-Jun) signaling pathway. Therefore, Fosb is significantly upregulated in AKI and associated with inflammation mediated by the AP-1 signaling pathway, suggesting its potential as a diagnostic biomarker and therapeutic target for AKI.
Insights
Fosb is a key gene significantly upregulated in acute kidney injury (AKI), driving inflammation via the AP-1 pathway. Targeting Fosb may offer new diagnostic and therapeutic strategies for AKI patients.
Area of Science:
- Molecular Biology
- Genomics
- Nephrology
Background:
- Acute kidney injury (AKI) is a critical condition with high mortality, necessitating deeper understanding of its molecular underpinnings.
- Identifying molecular mechanisms is crucial for developing effective AKI treatments.
Purpose of the Study:
- To identify key genes and pathways involved in AKI pathogenesis.
- To investigate the role of Fosb as a potential biomarker and therapeutic target in AKI.
Main Methods:
- Differential gene expression analysis using the Gene Expression Omnibus (GEO) database.
- Weighted Gene Co-expression Network Analysis (WGCNA) and protein-protein interaction (PPI) network construction.
- Validation of hub gene expression using qPCR, Western blotting, IHC, and flow cytometry.
Main Results:
- 1265 differentially expressed genes (DEGs) associated with AKI were identified, enriched in kidney development and metabolic pathways.
- WGCNA identified 290 AKI-related DEGs, with Fosb emerging as a crucial upregulated hub gene.
- Fosb upregulation was confirmed in ATN patients and AKI models; its inhibition reduced apoptosis and inflammation by suppressing the Fosb/C-Jun (AP-1) pathway.
Conclusions:
- Fosb is significantly upregulated in AKI and promotes inflammation through the AP-1 signaling pathway.
- Fosb presents potential as a diagnostic biomarker and therapeutic target for acute kidney injury.
Related Concept Videos
Acute Kidney Injury I: Introduction
Acute Kidney Injury II: Pathophysiology
Acute Kidney Injury III: Clinical Manifestations
Acute Kidney Injury IV: Diagnostic Studies and Prevention
Acute Kidney Injury V: Interprofessional Care
Acute Kidney Injury VI: Nursing Management

