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Using Natural Language Processing to Automate Screening of Abstracts for Neurosurgical Guideline Creation
Vijay Nitturi1, Alex Flores1,2, David F Bauer1,2
1Department of Neurosurgery, Baylor College of Medicine, Houston , Texas , USA.
Background And Objectives:
The body of neurosurgical literature has grown exponentially with publication rates increasing year-over-year. Manual screening of abstracts for systematic review creation and guideline formation has become an arduous process because of the mass of literature. Natural Language Processing, namely, large language models (LLMs), has shown promise in automating the abstract screening process. We evaluated whether Gemini Pro and ChatGPT, two LLM, can automate the screening of abstracts for a guideline created by the Congress of Neurological Surgeons.
Methods:
We developed novel pipelines using Gemini Pro and ChatGPT-4o-mini to screen abstracts for guideline creation. We tested our pipeline using abstracts generated from the EMBASE search term provided in a Congress of Neurological Surgeons guideline on Chiari I malformations for a single population, intervention, comparison, and outcome question. We used only two inclusion/exclusion criteria and inputted a simplified version of the research question investigated.
Results:
Of the 1764 abstracts generated from the search, 22 were manually chosen to be relevant for guideline creation. Using Gemini Pro, 1043 articles were correctly excluded and only 1 was incorrectly excluded, resulting in a sensitivity of 95% and a specificity of 60%. Using ChatGPT-4o-mini, 1066 articles were correctly excluded, but only 4 articles were correctly included, resulting in a sensitivity of 18% and a specificity of 95%. Both pipelines completed the screening process in under 1 hour.
Conclusion:
We have developed novel LLM pipelines to automate abstract screening for neurosurgical guideline creation. This technology can reduce the time necessary for abstract screening processes from several weeks to a few hours. While further validation is required, this process could pave the way for evidence-based guidelines to be continuously updated in real time across medical fields.
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