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Updated: Jun 16, 2025

How to Quantify the Fraction of Photoactivated Fluorescent Proteins in Bulk and in Live Cells
Published on: January 7, 2019
A highly stable monomeric red fluorescent protein for advanced microscopy.
Haiyan Xiong1,2, Qiyuan Chang1,2, Jiayi Ding3,4
1Key Laboratory of Clinical Laboratory Technology for Precision Medicine, Institute of Neuroscience, and Fujian Key Laboratory of Molecular Neurology, Public Technology Service Center, Fujian Medical University, Fuzhou, China.
Researchers developed mScarlet3-H, a highly stable red fluorescent protein (RFP). This new RFP enables advanced microscopy techniques and rapid tissue clearing, overcoming limitations of existing red fluorescent proteins.
Area of Science:
- Biophysics
- Molecular Biology
- Microscopy
Background:
- Fluorescent proteins (FPs) are essential tools for biological imaging.
- Stable green and yellow FPs are available, but stable monomeric red FPs (RFPs) are limited.
- This limits advanced imaging applications requiring red fluorescence.
Purpose of the Study:
- To develop an extremely stable monomeric red fluorescent protein (RFP).
- To characterize its structure and performance in various microscopy techniques.
- To establish mScarlet3-H as a superior RFP for multimodality imaging.
Main Methods:
- Development and structural determination (1.5 Å resolution) of a novel monomeric RFP, mScarlet3-H.
- Assessment of mScarlet3-H stability under thermal, chaotropic, and oxidative stress.
- Benchmarking mScarlet3-H performance in live-cell imaging, super-resolution microscopy, and tissue clearing.
Main Results:
- mScarlet3-H demonstrates exceptional stability against various stressors.
- It enables rapid whole-organ tissue clearing and long-term 3D structured illumination microscopy.
- High photostability and signal-to-noise ratio facilitate dual-color live-cell super-resolution imaging.
Conclusions:
- mScarlet3-H is a highly stable monomeric RFP suitable for demanding imaging applications.
- It significantly advances correlative light and electron microscopy and live-cell imaging.
- mScarlet3-H complements green FPs for multiplexed imaging in diverse biological systems.
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