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A comparison of methods for analysing compositional data with fixed and variable totals: a simulation study using the
Georgia D Tomova1,2,3, Rosemary Walmsley4, Laurie Berrie5
1The Alan Turing Institute, British Library, 96 Euston Road, London, NW1 2DB, UK. gtomova@turing.ac.uk.
Choosing the right analysis method for compositional data is crucial. Simulation shows that incorrect parameterization severely impacts results, especially with variable totals and larger reallocations.
Area of Science:
- Statistics
- Biostatistics
- Data Science
Background:
- Compositional data represent parts of a whole, with either fixed or variable totals.
- Existing analysis methods include isocaloric/isotemporal models, ratio variables, and compositional data analysis (CoDA).
- Previous comparisons relied on real data, limiting understanding of true model performance.
Purpose of the Study:
- To evaluate and compare the performance of different compositional data analysis approaches using simulations.
- To investigate how parameterization matching influences model accuracy under various conditions.
- To assess the impact of fixed versus variable totals on analysis outcomes.
Main Methods:
- Simulated physical activity (fixed total) and dietary (variable total) data.
- Employed linear, log2, and isometric log-ratio relationships between components and an outcome (fasting plasma glucose).
- Evaluated generalized linear/additive models and CoDA for 1-unit and larger reallocations (10- or 100-unit).
Main Results:
- Model performance is contingent on the parameterization aligning with the data-generating process.
- Incorrect parameterization leads to more severe errors with larger reallocations and variable totals.
- Ratio variable models, equivalent to linear models for fixed totals, diverge significantly for variable totals.
Conclusions:
- Compositional data with fixed and variable totals exhibit distinct behaviors.
- All analytical approaches have utility but require careful selection based on data characteristics.
- Investigate the relationship shape and choose the analytical method that best matches it.
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