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Updated: May 10, 2025

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
Published on: June 17, 2012
Revolutionizing Speciality Teas: Multi-omics prospective to breed anthocyanin-rich tea
Shimran Yadav1, Mohammed Saba Rahim2, Amna Devi1
1Molecular Genetics and Genomics Laboratory, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, -176061, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Abstract:
Variations in metabolite accumulation particularly anthocyanins have been of keen interest to the global tea industry due to their potential health benefits. Previous studies on tea genome, transcriptome, and metabolome provided an integrated spectrum of bioactive metabolites biosynthesis in tea plants. However, comprehending knowledge of anthocyanin biosynthesis and its accumulation in tea plants needed to be unified with multi-omics approaches that can build a complete depiction of the regulatory genomic machinery for improving quality characteristics in tea. Furthermore, true visualization, interpretation, and precise dissection of key traits required significant enrichment of multi-omics data for integration of machine learning. This review emphasizes the role of genetics, epigenetics, and transcriptional regulation of early (EBG) and late biosynthetic genes (LBG) involved in anthocyanin biosynthesis and accumulation in purple tea. Additionally, other factors including key transcription factors, transporters, photosynthesis, vacuole pH, and co-biosynthesis of other flavonoids were discussed. We envision an integration of pangenome and genome-wide strategies (GWAS, mGWAS, EWAS) which can offer new insights for the breeding of anthocyanin-rich tea cultivars to fetch better trade revenue and nutraceutical benefits.
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