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Updated: Jun 16, 2025

Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments
Published on: July 24, 2018
Root microbiota regulates tiller number in rice.
Jingying Zhang1, Bing Wang2, Haoran Xu3
1Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; Peking-Tsinghua Center for Life Sciences, State Key Laboratory of Gene Function and Modulation Research, Peking-Tsinghua-NIBS Graduate Program, School of Life Sciences, Peking University, Beijing 100871, China; CAS-JIC Centre of Excellence for Plant and Microbial Science, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
The root microbiota significantly influences rice tillering. A bacterial compound, cyclo(Leu-Pro), activates the strigolactone (SL) pathway, regulating tiller number for sustainable agriculture.
Area of Science:
- Plant Science
- Microbiology
- Agronomy
Background:
- Rice tillering is a crucial agronomic trait influenced by genetics and environment.
- The impact of root microbiota on rice tillering remains largely unexplored.
Purpose of the Study:
- To investigate the correlation between root microbiota composition and rice tiller number.
- To elucidate the mechanisms by which root bacteria modulate rice tillering.
Main Methods:
- Analysis of root microbiota composition and tiller numbers in 182 rice varieties.
- Cultivation of bacterial isolates to test their effect on tillering in lab and field.
- Genetic, biochemical, and structural analyses to identify the molecular mechanism.
Main Results:
- A significant correlation was found between root microbiota composition and rice tiller number.
- Bacterial isolates demonstrated the ability to regulate rice tillering.
- Cyclo(Leu-Pro) from Exiguobacterium R2567 activates the strigolactone (SL) signaling pathway by binding to OsD14, inhibiting tillering.
Conclusions:
- Root microbiota plays a significant role in regulating rice tillering.
- The cyclo(Leu-Pro) molecule mediates this regulation via the SL pathway.
- Harnessing root microbiota offers a sustainable strategy for optimizing crop growth.
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