Lattice-based stochastic models motivate non-linear diffusion descriptions of memory-based dispersal
Related Experiment Video
Updated: May 17, 2025

3D Modeling of Dendritic Spines with Synaptic Plasticity
Published on: May 18, 2020
Yifei Li1, Matthew J Simpson2,3, Chuncheng Wang4,5
1School of Mathematics, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. yifeili@hit.edu.cn.
Abstract:
The role of memory and cognition in the movement of individuals (e.g. animals) within a population, is thought to play an important role in population dispersal. In response, there has been increasing interest in incorporating spatial memory effects into classical partial differential equation (PDE) models of animal dispersal. However, the specific detail of the transport terms, such as diffusion and advection terms, that ought to be incorporated into PDE models to accurately reflect the memory effect remains unclear. To bridge this gap, we propose a straightforward lattice-based model where the movement of individuals depends on both crowding effects and the historic distribution within the simulation. The advantage of working with the individual-based model is that it is straightforward to propose and implement memory effects within the simulation in a way that is more biologically intuitive than simply proposing heuristic extensions of classical PDE models. Through deriving the continuum limit description of our stochastic model, we obtain a novel nonlinear diffusion equation which encompasses memory-based diffusion terms. For the first time we reveal the relationship between memory-based diffusion and the individual-based movement mechanisms that depend upon memory effects. Through repeated stochastic simulation and numerical explorations of the mean-field PDE model, we show that the new PDE model accurately describes the expected behaviour of the stochastic model, and we also explore how memory effects impact population dispersal.
More Related Videos
06:55Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
Published on: September 26, 2016
11:58Lateral Diffusion and Exocytosis of Membrane Proteins in Cultured Neurons Assessed using Fluorescence Recovery and Fluorescence-loss Photobleaching
Published on: February 29, 2012
Related Concept Videos
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
Mechanistic Models: Compartment Models in Individual and Population Analysis
Protein Diffusion in the Membrane
Long-term Depression
Calcium Ion Concentration Mechanism
If over...
Interference and Decay
Interference occurs when competing memories hinder the retrieval of particular information. It can be classified into two types: proactive and retroactive interference. Proactive...
Distribution and Dispersion