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Updated: May 23, 2025

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
Genotoxic stress triggers Scd6-dependent regulation of translation to modulate the DNA damage response
Gayatri Mohanan1, Raju Roy1,2, Hélène Malka-Mahieu3,4
1Department of Biochemistry, Indian Institute of Science, Bangalore, 560012, India.
Abstract:
The role of mRNA translation and decay in the genotoxic stress response remains poorly explored. Here, we identify the role of yeast RGG motif-containing RNA binding protein Scd6 and its human ortholog LSM14A in genotoxic stress response. Scd6 localizes to cytoplasmic puncta upon cell treatment with various genotoxic agents. Scd6 genetically interacts with SRS2, a DNA helicase with an anti-recombination role in DNA damage repair under HU stress. Scd6 directly interacts with the SRS2 mRNA to repress its translation in cytoplasmic granules upon HU stress in an eIF4G1-independent manner. Scd6-SRS2 interaction is modulated by arginine methylation and the LSm-domain of Scd6, which acts as a cis-regulator of Scd6 arginine methylation. LSM14A regulates the translation of mRNAs encoding key NHEJ (Non-homologous end-joining) proteins such as RTEL1 (SRS2 functional homolog) and LIG4. NHEJ activity in yeast and mammalian cells is regulated by Scd6 and LSM14A, respectively. Overall, this report unveils the role of RNA binding proteins in regulating the translation of specific mRNAs coding for DNA damage response proteins upon genotoxic stress.
Insights
RNA-binding proteins Scd6 and LSM14A regulate DNA damage repair by controlling mRNA translation of key proteins. This study reveals their crucial role in the genotoxic stress response.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- The role of mRNA translation and decay in genotoxic stress response is not well understood.
- RNA-binding proteins are involved in various cellular processes, but their specific roles in DNA damage response are still being elucidated.
Purpose of the Study:
- To investigate the function of yeast RGG motif-containing RNA binding protein Scd6 and its human ortholog LSM14A in genotoxic stress response.
- To identify the mechanisms by which these proteins regulate DNA damage repair pathways.
Main Methods:
- Utilized yeast and mammalian cell models.
- Investigated protein localization, genetic interactions, and direct mRNA interactions.
- Assessed the impact on translation regulation and DNA repair pathways like Non-homologous end-joining (NHEJ).
Main Results:
- Scd6 localizes to cytoplasmic puncta under genotoxic stress and interacts with SRS2 mRNA to repress its translation.
- Scd6 and LSM14A regulate the translation of mRNAs encoding key DNA damage response proteins, including SRS2, RTEL1, and LIG4.
- NHEJ activity is modulated by Scd6 in yeast and LSM14A in mammalian cells.
Conclusions:
- RNA-binding proteins Scd6 and LSM14A play critical roles in the genotoxic stress response.
- These proteins regulate DNA damage repair by controlling the translation of specific mRNAs encoding DNA repair proteins.
- The findings uncover a novel mechanism of gene regulation in response to DNA damage.
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