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Updated: May 10, 2025

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Unraveling the Unseen Players in the Ocean - A Field Guide to Water Chemistry and Marine Microbiology
Published on: November 5, 2014
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Climate-driven succession in marine microbiome biodiversity and biogeochemical function
Alyse A Larkin1, Melissa L Brock2, Adam J Fagan1
1Department of Earth System Science, University of California, Irvine, CA, USA.
Nature Communications
|April 25, 2025
Summary
Marine microbes show distinct seasonal and El Niño-Southern Oscillation (ENSO) warming responses, impacting ocean function. Climate change drives these shifts, affecting microbial diversity, carbon cycling, and nutrient stress in the California Current.
Area of Science:
- Marine microbiology
- Oceanography
- Climate change science
Background:
- Climate-driven environmental cycles significantly impact marine microbiome diversity.
- Microbiome functional responses to these cycles are poorly understood.
- Seasonal and El Niño-Southern Oscillation (ENSO) warming mimic projected climate change impacts on oceans.
Purpose of the Study:
- To quantify microbial genomic diversity and function changes over 11 years.
- To analyze responses to seasonal and ENSO cycles in the California Current.
- To link microbial biodiversity shifts to functional potential changes.
Main Methods:
- 11-year study of microbial genomic diversity and function.
- Analysis of seasonal and ENSO-driven oceanographic cycles.
- Quantification of microbial lineages, functional genes, and biogeochemical indicators.
Main Results:
- Observed seasonal oscillations between large-genome (winter/spring) and small-genome (summer/fall) lineages.
- Identified interannual community shifts correlated with ENSO conditions.
- Ocean warming led to reduced iron, increased macronutrient stress genes, depressed carbon degradation, and higher carbon-to-nutrient ratios.
Conclusions:
- Microbial biodiversity and function exhibit consistent responses to climate-driven cycles across timescales.
- These findings highlight significant climate-driven alterations in marine ecosystems and biogeochemical cycles.
- The California Current microbial ecosystem demonstrates sensitivity to warming and ENSO events.
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