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Updated: May 10, 2025

Three-Dimensional Imaging of Organoids to Study Primary Ciliogenesis During ex vivo Organogenesis
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Investigating plant morphogenesis using 3D digital organs.

Tejasvinee A Mody1, Ratula Ray1, Kay Schneitz1

  • 1Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany.

Journal of Experimental Botany
|April 28, 2025
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Summary
This summary is machine-generated.

Creating 3D digital plant organs with single-cell resolution advances our understanding of plant morphogenesis. This technology reveals evolutionary shifts in cellular patterns driving plant form diversity.

Keywords:
3D cellular architecture3D digital organevo-devofinite element modellingmorphogenesisnetwork scienceplant developmenttopology

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Area of Science:

  • Plant Biology
  • Developmental Biology
  • Computational Biology

Background:

  • Understanding plant organ size and shape (morphogenesis) is crucial but challenging due to limitations in 3D imaging and analysis of deep tissues.
  • Classical methods struggle to capture cellular and supracellular growth patterns influencing organ form.

Purpose of the Study:

  • To review the experimental and computational tools for generating and analyzing 3D digital plant organs.
  • To highlight how 3D digital organs advance the study of plant morphogenesis.
  • To explore evolutionary insights gained from cross-species comparative analyses of 3D digital organs.

Main Methods:

  • Utilizing advanced imaging techniques for high-resolution 3D data acquisition.
  • Employing artificial intelligence-based image processing for accurate 3D cell segmentation.
  • Generating digital reconstructions of plant organs at single-cell resolution.

Main Results:

  • Demonstration of a robust experimental toolbox for 3D digital organ generation and analysis.
  • Illustration of how 3D digital organs provide novel insights into plant morphogenesis.
  • Evidence of evolutionary shifts in cellular patterns contributing to plant morphological diversity.

Conclusions:

  • The advent of 3D digital organs has revolutionized the study of plant tissue morphogenesis.
  • This approach opens new frontiers for investigating the cellular basis of form and evolution in plants.
  • Cross-species comparisons of 3D digital organs are key to understanding plant morphological diversity.