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Discovery of Dynamic Models for AML Disease Progression from Longitudinal Multi-Modal Clinical Data Using Explainable
Reza Mousavi1, Moaath K Mustafa Ali2, Daniel Lobo1,3
1Department of Biological Sciences, University of Maryland, Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250, USA.
This study introduces an explainable machine learning method to predict Acute Myeloid Leukemia (AML) progression using patient data. The approach accurately forecasts disease dynamics, offering potential for other acute conditions.
Area of Science:
- Oncology
- Computational Biology
- Medical Informatics
Background:
- Acute Myeloid Leukemia (AML) is a complex, aggressive cancer with high mortality.
- Effective prediction models require integrating longitudinal patient data.
- Understanding disease dynamics is crucial for research and clinical applications.
Purpose of the Study:
- To develop a robust methodology for discovering dynamic predictive models of AML progression.
- To elucidate the clinical, genetic, and treatment features influencing AML disease dynamics.
- To create an explainable machine learning algorithm for predicting AML progression.
Main Methods:
- Utilized a novel longitudinal multimodal clinical dataset of AML patients.
- Employed high-performance evolutionary computation for an explainable machine learning algorithm.
- Discovered mathematical models, including interactions, parameters, and nodes, predictive of AML progression.
Main Results:
- The methodology accurately estimated AML clinical dynamics, specifically blast percentages.
- Predictions were validated for both training and novel patient cohorts.
- Identified key clinical, genetic, and treatment features modulating disease progression.
Conclusions:
- The explainable machine learning approach successfully predicts AML progression using heterogeneous longitudinal data.
- This methodology demonstrates significant potential for modeling other acute disease progression dynamics.
- Provides a flexible framework for advancing clinical and translational research in oncology.
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