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Published on: March 18, 2019
MiRNA-mRNA network in osteoporotic fractures proposes the functional mechanism of hsa-miR-32-3p/TNFSF11 axis
Yukai Zeng1,2, Bo Zhao3, Jiawei Gong4
1School of Biomedical Engineering, Capital Medical University, Beijing, 100069, China.
Background And Aims:
This study aimed to construct a miRNA-mRNA network in OF and explored the effect of the hsa-miR-32-3p/TNFSF11 axis on osteoclast function.
Methods:
GSE70318 and GSE74209 datasets were used to filter the differentially expressed miRNAs in OF. Then, the targets of these miRNAs intersected with the disease genes of OF. The target genes were annotated using GO terms and KEGG pathway enrichment analysis. The network for miRNA-gene-top 30 GO terms/top 20 pathways was drawn. Sankey diagrams were drawn for Parathyroid hormone synthesis, secretion, and action pathway (hsa04928) and ossification (GO:0001503) related to osteoporotic fracture. The hsa-miR-32-3p/TNFSF11 axis was selected for expression and functional verification.
Results:
A total of 21 differentially expressed miRNAs in OF were obtained by analyzing GSE70318 and GSE74209 datasets. A total of 36 genes were related to OF among the miRNA-targets. The genes were enriched in GO terms and KEGG pathways related to OF. Parathyroid hormone synthesis, secretion, and action pathway (hsa04928) and ossification proposed that the hsa-miR-32-3p/TNFSF11 axis may be involved in OF. The expression level of hsa-miR-32-3p was decreased in patients with low bone mineral density (BMD) and fracture, while the expression level of TNFSF11 mRNA was increased. Hsa-miR-32-3p complementarily bound with TNFSF11. Hsa-miR-32-3p inhibited osteoclast activation, while TNFSF11 promoted osteoclast activation.
Conclusions:
The miRNA-mRNA network in OF proposed the TNFSF11 as a downstream target of hsa-miR-32-3p. The hsa-miR-32-3p/TNFSF11 axis was involved in the regulation of osteoclast activity.
Clinical Trial Number:
Not applicable.
Insights
This study reveals that decreased hsa-miR-32-3p and increased TNFSF11 expression in osteoporotic fracture (OF) patients regulate osteoclast activity. The hsa-miR-32-3p/TNFSF11 axis is implicated in OF pathogenesis.
Area of Science:
- Molecular Biology
- Genomics
- Biochemistry
Background:
- Osteoporotic fracture (OF) is a significant health concern linked to bone metabolism.
- MicroRNAs (miRNAs) and their mRNA targets play crucial roles in bone remodeling and disease pathogenesis.
Purpose of the Study:
- To construct a miRNA-mRNA regulatory network in osteoporotic fracture (OF).
- To investigate the role of the hsa-miR-32-3p/TNFSF11 axis in osteoclast function and OF.
Main Methods:
- Differential expression analysis of miRNAs using GSE70318 and GSE74209 datasets.
- Construction of a miRNA-mRNA network and pathway enrichment analysis (GO, KEGG).
- Validation of the hsa-miR-32-3p/TNFSF11 axis expression and function in osteoclast activity.
Main Results:
- Identified 21 differentially expressed miRNAs and 36 target genes in OF.
- The hsa-miR-32-3p/TNFSF11 axis was significantly associated with OF pathogenesis.
- Decreased hsa-miR-32-3p and increased TNFSF11 expression correlated with low bone mineral density and fracture; hsa-miR-32-3p inhibited osteoclast activation, while TNFSF11 promoted it.
Conclusions:
- The study established a miRNA-mRNA network implicating TNFSF11 as a target of hsa-miR-32-3p in OF.
- The hsa-miR-32-3p/TNFSF11 axis is a key regulator of osteoclast activity in the context of osteoporotic fracture.
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