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Updated: May 12, 2025

Preparation of Enantiopure Non-Activated Aziridines and Synthesis of Biemamide B, D, and epiallo-Isomuscarine
Published on: June 13, 2022
Using the amide 15N CEST NMR experiment to study slow exchange between 'visible' protein states
Nihar Pradeep Khandave1, Ved Prakash Tiwari1, Pramodh Vallurupalli1
1Tata Institute of Fundamental Research Hyderabad, 36/P, Gopanpally Village, Serilingampally Mandal, Ranga Reddy District, Hyderabad 500046, India.
Abstract:
Slow exchange between 'visible' protein states is often studied using the two-dimensional ZZ exchange class of magnetisation transfer experiments. However, the cross-peaks that arise due to magnetisation transfer between different states can lead to additional overlap in the two-dimensional ZZ exchange NMR spectrum. To overcome this overlap problem, here we have explored the utility of the 15N CEST experiment as an alternative to the 1HN-15N ZZ exchange experiment to study exchange between 'visible' protein states. In the case of two-state exchange, the 1HN-15N correlation map contains two correlations for each exchanging site, one arising from each state. Thus, two 15N CEST profiles can be recorded for each of these sites using a single 15N CEST experiment. We find that site-specific exchange parameters can then be obtained by simultaneously analysing both these 15N CEST profiles recorded at a single 'high' B1 field supplemented with experimentally derived information regarding the initial magnetisation or as in the case of the ZZ exchange experiment, the minor state population. The utility of the 15N CEST based approach to characterise exchange between visible protein states is demonstrated by studying the interconversion of the ∼18 kDa T34A mutant of T4 lysozyme between its native state and a minor state populated to ∼21 % (exchange rate ∼5 s-1) at 40 °C.
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