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Updated: May 9, 2025

Evaluation of the Interplay Between the Complement Protein C1q and Hyaluronic Acid in Promoting Cell Adhesion
Published on: June 15, 2019
Structure of the complex of C1q-like 3 protein with adhesion-GPCR BAI3
Yi Miao1,2,3, Haoqing Wang4, Kevin M Jude5,6,7
1Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA, USA. yimiao@ust.hk.
Insights
Researchers elucidated the molecular basis of how Brain-specific Angiogenesis Inhibitor-3 (BAI3) binds to C1q-like proteins (C1qls) using cryo-EM. This reveals a novel hexameric complex crucial for synaptic organization in the brain.
Area of Science:
- Neuroscience
- Structural Biology
- Molecular Biology
Background:
- The adhesion-GPCR BAI3 is vital for synaptic organization.
- The interaction between BAI3 and its ligand C1qls is not well understood.
Purpose of the Study:
- To determine the structural basis of the C1ql3-BAI3 complex formation.
- To elucidate the molecular mechanisms underlying BAI3-mediated synaptic organization.
Main Methods:
- Single-particle cryo-electron microscopy (cryo-EM) at 2.8 Å resolution.
- Mutant analysis.
- Cell surface staining.
Main Results:
- Determined the cryo-EM structure of the C1ql3-BAI3 complex, revealing a hexameric assembly.
- C1ql3 forms a homotrimer that binds three BAI3 molecules in its inter-domain grooves.
- Identified calcium ion-mediated interactions distinct from other C1q-like domain complexes.
- Mutant analysis confirmed key residues involved in the interaction.
Conclusions:
- The study reveals a unique hexameric binding mechanism between C1ql3 and BAI3.
- This structural insight enhances understanding of C1ql-BAI3-mediated synaptic organization.
- The findings shed light on the functional dynamics of BAI3 in neural synapses.
Abstract:
The adhesion-GPCR Brain-specific Angiogenesis Inhibitor-3 (BAI3) plays a crucial role in organizing synapses in the brain. However, how BAI3 engages one of its ligands, the C1q-like proteins (C1qls), remains largely unexplored. Here, we present the single-particle cryo-electron microscopy (cryo-EM) structure of the C1ql3-BAI3 complex at 2.8 Å resolution. The structure reveals a hexameric configuration, where C1ql3 forms a central homotrimer that effectively captures three BAI3 molecules. These BAI3 molecules fit snugly into the grooves between the trimeric C1q domains of the C1qls, employing calcium ion (Ca2+)-mediated interactions that differ from previously characterized structures of C1q-like domain-mediated complexes. Furthermore, we conducted mutant analysis and cell surface staining, which confirmed the essential contact residues involved in this interaction. This unique binding mechanism not only enhances our understanding of the C1ql-BAI3-mediated synaptic organization but also sheds light on the functional dynamics of BAI3 in the brain.
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