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Published on: April 6, 2014
Cyclosporine A Accelerates Neurorecovery Transcriptional Trajectory in a Swine Model of Diffuse Traumatic Brain
Oluwagbemisola Aderibigbe1, Levi B Wood1,2, Susan S Margulies1
1Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA.
Insights
Mild traumatic brain injury (mTBI) causes lasting deficits. This study reveals gene expression changes in swine brains after mTBI and shows cyclosporine A (CsA) may promote neurorecovery.
Area of Science:
- Neuroscience
- Genomics
- Traumatic Brain Injury Research
Background:
- Mild traumatic brain injury (mTBI) is a significant cause of morbidity in children, leading to persistent neurological, cognitive, and emotional deficits.
- The underlying transcriptional changes driving these long-term effects post-mTBI remain incompletely understood.
- Understanding gene expression alterations is crucial for developing effective therapeutic strategies.
Purpose of the Study:
- To investigate the transcriptional landscape of the brain following mild traumatic brain injury (mTBI) in a swine model.
- To characterize the temporal patterns of gene expression changes in distinct brain regions (frontal cortex and hippocampus + amygdala) at acute (1 day) and subacute (1 week) time points post-injury.
- To evaluate the potential neuroprotective and recovery-promoting effects of cyclosporine A (CsA) treatment on mTBI-induced transcriptional alterations.
Main Methods:
- Utilized formalin-fixed paraffin-embedded (FFPE) tissues from swine brains (N = 40) subjected to rapid non-impact head rotation (RNR) to model mTBI.
- Performed RNA sequencing to identify differentially expressed genes (DEGs) at 1 day and 1 week after injury.
- Classified DEGs into temporal patterns and analyzed shared gene ontology annotations to understand biological processes affected by mTBI.
- Administered cyclosporine A (CsA) treatment (20 mg/kg/day) starting 6 hours post-injury for 1 day to assess its impact on gene expression.
Main Results:
- Differentially expressed genes (DEGs) were more abundant at 1 week post-injury compared to 1 day, indicating evolving transcriptional responses.
- Gene ontology analysis revealed terms associated with neuronal distress at 1 day and neurorecovery at 1 week post-mTBI in both studied brain regions.
- CsA treatment significantly modulated DEGs, accelerating transcriptional profiles associated with neurorecovery in both the frontal cortex (466 DEGs) and hippocampus + amygdala (2794 DEGs).
Conclusions:
- Anatomic region and elapsed time significantly influence gene expression patterns following mTBI.
- The study highlights distinct temporal transcriptional signatures of neuronal distress and subsequent neurorecovery post-mTBI.
- Cyclosporine A (CsA) demonstrates potential as a therapeutic agent to promote neurorecovery after mTBI by modulating key transcriptional pathways.
Abstract:
Mild traumatic brain injury (mTBI) is a leading cause of morbidity in children with both short- and long-term neurological, cognitive, cerebrovascular, and emotional deficits. These deficits have been attributed to ongoing pathophysiological cascades that occur acutely and persist post-injury. Given our limited understanding of the transcriptional changes associated with these pathophysiological cascades, we studied formalin-fixed paraffin-embedded (FFPE) tissues from the frontal cortex (FC) and the hippocampus + amygdala (H&A) regions of swine (N = 40) after a sagittal rapid non-impact head rotation (RNR). We then sequenced RNA to define transcriptional changes at 1 day and 1 week after injury and investigated the protective influence of cyclosporine A (CsA) treatment. Differentially expressed genes (DEGs) were classified into five temporal patterns (Early, Transient, Persistent, Intensified, Delayed, or Late). DEGs were more abundant at 1 week than 1 day. Shared significant gene ontology annotations in both regions included terms associated with neuronal distress at 1 day and neurorecovery at 1 week. CsA (20 mg/kg/day) infused for 1 day (beginning at 6 h after injury) accelerated 466 DEGs in the FC and 2794 DEGs in the H&A, such that the CsA-treated transcriptional profile was associated with neurorecovery. Overall, our data reveal the effects of anatomic region and elapsed time on gene expression post-mTBI and motivate future studies of CsA treatment.
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