Decoding elegant interplay among different stereo-electronic effects due to the ancient prolyl-4-hydroxylation stabilizing collagenous helicity
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Updated: May 13, 2025

Preparation of 3D Collagen Gels and Microchannels for the Study of 3D Interactions In Vivo
Published on: May 9, 2016
Ashutosh Joshi1, Trayambak Basak1, Bhaskar Mondal2
1School of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Mandi, Himachal Pradesh 175075, India.
Abstract:
Prolyl-4-hydroxylation is an ancient evolutionarily conserved post-translational modification (PTM) critical for both structural and regulatory functions in multicellular life forms. This PTM plays a pivotal role in stabilizing collagen's triple helix by influencing the puckering of the pyrrolidine ring. The elegant interplay between ring pucker, torsional angles, peptide bond isomerization, and charge-transfer interactions (O···C=O n→π∗ and σ→σ∗) attaining the helical stability remains underappreciated. Using density functional theory calibrated against gold standard ab initio methods, we analyzed a physiologically relevant collagenous peptide proline-4-hydroxyproline-glycine (PO4G) to establish the correlation between stereo-electronic effects due to prolyl-4-hydroxylation. Our results show that 4(R)-hydroxylation promotes an exo ring pucker, optimizing main-chain torsional angles for a stable trans peptide bond and maximizing the n→π∗ interaction (E n→π∗ = 0.9 kcal/mol) by tuning Bürgi-Dunitz trajectory, and maximizes σ→σ∗ interactions between axial C-H σ-electrons and C-OH∗ orbitals of the pyrrolidine ring. This study reveals the intricate stereo-electronic effects driving collagen's structural stability.
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