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Published on: November 11, 2016
Structure of the human TWIK-2 potassium channel and its inhibition by pimozide
Nandish K Khanra1, Chongyuan Wang1, Bryce D Delgado1,2
1Structural Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Abstract:
The potassium channel TWIK-2 is crucial for ATP-induced activation of the NLRP3 inflammasome in macrophages. The channel is a member of the two-pore domain potassium (K2P) channel superfamily and an emerging therapeutic target to mitigate severe inflammatory injury involving NLRP3 activation. We report the cryo-EM structure of human TWIK-2. In comparison to other K2P channels, the structure reveals an unusual "up" conformation of Tyr111 in the selectivity filter and a resulting SF1-P1 pocket behind the filter. Density for acyl chains is present in fenestrations within the transmembrane region that connects the central cavity of the pore to the lipid membrane. Despite its importance as a drug target, limited pharmacological tools are available for TWIK-2. A previous study suggested that the FDA-approved small molecule pimozide might inhibit TWIK-2. Using a reconstituted system, we show that pimozide directly inhibits the channel and we determine a cryo-EM structure of a complex with the drug. Pimozide displaces the acyl chains within the fenestrations and binds below the selectivity filter where it would impede ion permeation. The drug may access its binding site by lateral diffusion in the membrane, suggesting that other hydrophobic small molecules could have utility for inhibiting TWIK-2. The work defines the structure of TWIK-2 and provides a structural foundation for development of more specific inhibitors with potential utility as anti-inflammatory drugs.
Insights
The potassium channel TWIK-2, vital for inflammasome activation, has its structure revealed by cryo-EM. The drug pimozide directly inhibits TWIK-2, offering a potential anti-inflammatory therapeutic strategy.
Area of Science:
- Structural biology
- Molecular pharmacology
- Immunology
Background:
- The potassium channel TWIK-2 (Twik-related intermal potassium channel 2) is essential for ATP-induced activation of the NLRP3 inflammasome in macrophages.
- TWIK-2, a member of the two-pore domain potassium (K2P) channel superfamily, is an emerging therapeutic target for inflammatory diseases.
- Limited pharmacological tools exist for TWIK-2, hindering the development of anti-inflammatory drugs.
Purpose of the Study:
- To determine the cryo-electron microscopy (cryo-EM) structure of human TWIK-2.
- To investigate the inhibitory mechanism of pimozide on TWIK-2.
- To provide a structural basis for developing novel TWIK-2 inhibitors.
Main Methods:
- Cryo-electron microscopy (cryo-EM) for structural determination.
- Reconstituted channel system for functional assays.
- Pimozide inhibition assays.
Main Results:
- The cryo-EM structure of human TWIK-2 revealed an unusual conformation of Tyr111 in the selectivity filter and acyl chains in transmembrane fenestrations.
- Pimozide was shown to directly inhibit TWIK-2 by binding below the selectivity filter, displacing acyl chains.
- The structure of the TWIK-2-pimozide complex suggests potential drug access via lateral membrane diffusion.
Conclusions:
- The determined structure of TWIK-2 provides critical insights into its architecture and function.
- Pimozide directly inhibits TWIK-2, validating it as a potential anti-inflammatory therapeutic target.
- The findings lay the groundwork for designing specific TWIK-2 inhibitors for inflammatory conditions.
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