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Updated: May 14, 2025

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Murine Precision-Cut Liver Slices as an Ex Vivo Model of Liver Biology
Published on: March 14, 2020
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Time-course liver microarray data from 0 to 14 days in a 70% partial hepatectomy mouse model.
Takashi Nishi1, Yoshinao Oki2, Reiko Hagiwara1,3
1Laboratory of Cell and Tissue Biology, College of Bioresource Sciences, Nihon University, 1866 Kameino, Fujisawa, 252-0880, Japan.
Scientific Data
|May 10, 2025
Summary
This study analyzed gene expression changes after 70% partial hepatectomy (PH) in mice to understand liver regeneration. The data reveals key molecular events driving compensatory hypertrophy, aiding future research into liver repair mechanisms.
Area of Science:
- * Hepatology and regenerative medicine.
- * Molecular biology and genomics.
Background:
- * The liver possesses remarkable regenerative capacity, capable of restoring mass after significant resection through compensatory hypertrophy.
- * The precise molecular mechanisms governing liver regeneration following major surgical removal remain incompletely understood.
- * Understanding these mechanisms is crucial for developing therapeutic strategies for liver disease and injury.
Purpose of the Study:
- * To investigate the temporal gene expression profiles following 70% partial hepatectomy (PH) in a mouse model.
- * To correlate gene expression data with physiological measures of liver regeneration (body and liver weight).
- * To analyze the influence of individual variability on regenerative capacity.
Main Methods:
- * Procurement of microarray data at multiple time points (0-14 days) post-70% PH in mice.
- * Measurement of body weight and liver weight to assess compensatory hypertrophy.
- * Generation of three biological replicates per time point to capture individual differences.
- * Quality control assessment using RNA integrity number and QC statistics.
- * Hierarchical clustering and analysis of cell cycle-related gene expression for data validation.
Main Results:
- * High-quality microarray data were obtained, confirmed by RNA integrity and QC metrics.
- * Hierarchical clustering supported the reliability of the dataset.
- * Expression patterns of cell cycle-related genes provided insights into the regenerative process.
Conclusions:
- * The generated microarray dataset provides a valuable resource for studying liver regeneration.
- * This data facilitates the elucidation of molecular pathways involved in compensatory hypertrophy after 70% PH.
- * Further analysis of this dataset can uncover novel targets for promoting liver repair.

