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In vivo cortical microstructure mapping using high-gradient diffusion MRI accounting for intercompartmental water

Tanxin Dong1, Hong-Hsi Lee2, Han Zang1

  • 1Academy of Medical Engineering and Translational Medicine, Tianjin University, Tianjin, China; Tianjin Key Laboratory of Brain Science and Neuroengineering, Tianjin, China; Haihe Laboratory of Brain-Computer Interaction and Human-Machine Interaction, Tianjin, China.

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Summary

This study introduces the in vivo SANDIX model for mapping human brain microstructure using diffusion MRI. The model accurately measures tissue properties by accounting for water exchange, improving interpretation of neurobiological data.

Keywords:
ConnectomeCortexDiffusion MRIKärger modelMicrostructureWater exchange

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Area of Science:

  • Neuroimaging
  • Biophysics
  • Medical Physics

Background:

  • Diffusion MRI is crucial for mapping cortical microstructure.
  • Existing Soma And Neurite Density Imaging (SANDI) models do not account for water exchange, limiting accuracy in gray matter.
  • Understanding water exchange is vital for precise microstructural property estimation.

Purpose of the Study:

  • To systematically evaluate an extended SANDI model (in vivo SANDIX) that incorporates water exchange effects for in vivo human cortical microstructural mapping.
  • To assess the model's sensitivity to various microstructural parameters and water exchange times.
  • To validate the model's performance on in vivo diffusion MRI data.

Main Methods:

  • Developed the in vivo SANDIX model, extending SANDI to include water exchange via the anisotropic Kärger model.
  • Conducted Monte Carlo simulations to test model sensitivity to radii, compartment fractions, and exchange times.
  • Applied the in vivo SANDIX model to diffusion MRI data from 13 healthy adults acquired on a 3-Tesla Connectome MRI scanner.

Main Results:

  • The in vivo SANDIX model successfully accounts for water exchange, providing accurate intra-soma and intra-neurite signal fractions without parameter time-dependence.
  • Simulation results demonstrated model sensitivity and highlighted the need for cautious interpretation of measured water exchange times.
  • In vivo application revealed distinct water exchange times between gray and white matter, consistent with anatomical characteristics.

Conclusions:

  • The SANDIX approach, using high-gradient diffusion MRI, enables effective in vivo cortical microstructure mapping by evaluating water exchange effects.
  • This advanced model offers a more accurate description of in vivo cortical microstructure.
  • The findings enhance data interpretation for future neurobiological studies.