A novel cross-validated machine learning based Alertix-Cancer Risk Index for early detection of canine malignancies
- Hanan Sharif 1,2, Reza Arabi Belaghi 3, Kiran Kumar Jagarlamudi 2, Sara Saellström 4, Liya Wang 2, Henrik Rönnberg 2, Staffan Eriksson 1,2
- 1Alertix Veterinary Diagnostics, Stockholm, Sweden.
- 2Department of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
- 3Department of Energy and Technology, Swedish Agricultural University, Uppsala, Sweden.
- 4Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
- 0Alertix Veterinary Diagnostics, Stockholm, Sweden.
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View abstract on PubMed
Summary
This summary is machine-generated.A new machine learning model, Alertix-Cancer Risk Index (Alertix-CRI), combines canine Thymidine kinase 1 (TK1) and C-reactive protein (cCRP) levels for early tumor detection. This non-invasive biomarker approach significantly improves diagnostic accuracy in dogs.
Area Of Science
- Veterinary Medicine
- Biomarker Discovery
- Machine Learning in Oncology
Background
- Growing demand for non-invasive tumor biomarkers in veterinary medicine.
- Thymidine kinase 1 (TK1) is a known proliferation biomarker for canine malignancies.
- Combining TK1 with inflammatory biomarkers like canine C-reactive protein (cCRP) can enhance early tumor detection sensitivity.
Purpose Of The Study
- To develop and validate a machine learning model, Alertix-Cancer Risk Index (Alertix-CRI), for early canine tumor detection.
- To integrate canine TK1 protein, cCRP levels, and age into a predictive model.
- To assess the diagnostic performance of Alertix-CRI compared to individual biomarkers.
Main Methods
- Utilized 287 serum samples from healthy dogs and dogs with various tumors.
- Measured serum TK1 and cCRP levels using ELISA techniques.
- Developed Alertix-CRI using a generalized boosted regression model (GBM) with 70% training and 30% validation data.
Main Results
- Both TK1 and cCRP levels were significantly higher in tumor-bearing dogs (p < 0.0001).
- TK1 and cCRP showed similar sensitivity (54% vs. 51%) at 95% specificity for overall tumors.
- Alertix-CRI demonstrated high discriminatory capacity with an AUC of 0.98, achieving 90% sensitivity and 97% specificity.
Conclusions
- Alertix-CRI serves as a valuable decision-support tool for clinicians to differentiate malignant diseases in dogs.
- The model facilitates advancements in precise and dependable diagnostic tools for early cancer detection and therapy monitoring in veterinary medicine.
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