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Updated: May 17, 2025

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
Published on: August 9, 2019
Alternatively spliced mini-exon B in PTPδ regulates excitatory synapses through cell-type-specific trans-synaptic
Seoyeong Kim1,2, Jae Jin Shin2, Muwon Kang1,2
1Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea.
Protein tyrosine phosphatase delta (PTPδ) mini-exon B (meB) is crucial for survival and regulates excitatory synapses. PTPδ-meB mutations in mice cause abnormal behaviors and synaptic deficits, mediated by IL1RAP.
Area of Science:
- Neuroscience
- Molecular Biology
- Genetics
Background:
- Protein tyrosine phosphatase delta (PTPδ), encoded by PTPRD, is linked to neurological and neurodevelopmental disorders.
- PTPδ interacts with postsynaptic adhesion molecules via alternatively spliced mini-exons, meA and meB.
- The in vivo functions of PTPδ-meB remain largely uncharacterized.
Purpose of the Study:
- To investigate the in vivo function of the PTPδ-meB splice variant.
- To elucidate the role of PTPδ-meB in survival, synaptic function, and behavior.
- To identify molecular mechanisms underlying PTPδ-meB's effects on excitatory synapses.
Main Methods:
- Generation and analysis of homozygous PTPδ-meB-mutant mice (Ptprd-meB-/-).
- Behavioral testing and electrophysiological recordings in heterozygous Ptprd-meB+/- mice.
- Proteomic analysis of postsynaptic densities and investigation of IL1RAP-mutant mice.
Main Results:
- Homozygous Ptprd-meB-/- mice exhibit reduced early postnatal survival.
- Heterozygous Ptprd-meB+/- male mice display behavioral abnormalities and reduced excitatory synaptic transmission in dentate gyrus granule cells (DG-GCs).
- Decreased postsynaptic IL1RAP levels correlate with PTPδ-meB deficiency; IL1RAP-mutant mice show impaired excitatory transmission, while PTPδ-meB+/- interneurons with low IL1RAP show enhanced excitatory transmission.
Conclusions:
- PTPδ-meB plays a critical role in early survival, synaptic plasticity, and behavior.
- PTPδ-meB regulates excitatory synapses in a cell-type-specific manner.
- The IL1RAP pathway is essential for PTPδ-meB's function in modulating synaptic transmission.
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