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Raman and FT-IR Spectroscopy Coupled with Machine Learning for the Discrimination of Different Vegetable Crop Seed
Stefan M Kolašinac1, Marko Mladenović2, Ilinka Pećinar1
1Department of Agrobotany, Faculty of Agriculture, University of Belgrade, Nemanjina 6, 11180 Belgrade, Serbia.
Raman and FT-IR spectroscopy combined with machine learning accurately identify seed varieties. This approach offers a powerful tool for managing genetic resources in seed collections.
Area of Science:
- Spectroscopy
- Chemometrics
- Bioinformatics
Background:
- Accurate seed variety identification is crucial for crop management and genetic resource preservation.
- Traditional methods can be time-consuming and labor-intensive.
Purpose of the Study:
- To evaluate Raman and FT-IR spectroscopy for discriminating between seed varieties of paprika, tomato, and lettuce.
- To assess the efficacy of various chemometric models and machine learning algorithms for spectral data analysis.
Main Methods:
- Seeds were analyzed using Raman and FT-IR spectroscopy.
- Spectral data underwent pre-processing including smoothing, baseline correction, and normalization.
- Classification was performed using Principal Component Analysis (PCA), Support Vector Machines (SVM), Partial Least Square Discriminant Analysis (PLS-DA), and PCA-Quadratic Discriminant Analysis (PCA-QDA).
Main Results:
- Support Vector Machines (SVM) achieved high classification accuracies: 100% for lettuce, 99.37% for paprika, and 92.71% for tomato using Raman spectroscopy.
- FT-IR spectroscopy with SVM yielded accuracies of 99.37% for lettuce, 92.50% for paprika, and 97.50% for tomato.
- Merging Raman and FT-IR spectra improved classification accuracy, reaching 100% for lettuce and tomato, and 95% for paprika.
Conclusions:
- Raman and FT-IR spectroscopy, coupled with machine learning, provide a rapid and effective method for seed variety discrimination.
- This technique holds significant potential for the evaluation and management of genetic resources in seed banks.
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