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A Pathway Association Study Tool for GWAS Analyses of Metabolic Pathway Information
Published on: July 1, 2020
Discovering diabetes complications-related microRNAs: meta-analyses and pathway modeling approach
Ruiyang Yin1, Yanjiao Zhang1, Xinyi Fang1,2
1Institute of Metabolic Diseases, Guang'anmen Hospital, China Academy of Chinese Medical Sciences, Beijing, 100053, China.
Purpose:
MicroRNAs(miRNA) play an important role in the pathogenesis of diabetic complications by regulating gene expression. The objective of this paper is to investigate micoRNA expression in diabetic nephropathy (DN), diabetic retinopathy (DR), diabetic neuropathy (DNP), and diabetic cardiopathy (DC).
Methods:
We conducted this systematic review according to the Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA) statement and retrieved eligible microRNA-related studies of diabetic complications from PubMed, Embase, and Web of science databases. We enriched pathways corresponding to differentially expressed miRNAs using the miRPath tool on the DIANA website, and predicted their target genes with DIANA microT-CDS and TargetScan.
Results:
Although many of the selected studies were of high scientific quality, the results were heterogeneous. Among the 71 selected articles, 79 miRNAs were differentially expressed in various complications of diabetes, of which miRNA126, miRNA192 and 17 others were reported in at least two or more studies. A total of 156 target genes were predicted and 103 pathways were obtained by KEGG enrichment analysis.
Conclusion:
This comprehensive systematic evaluation provides experimental evidence statistics for miRNAs as circulating biomarkers and highlights promising biomarkers. These results provide preliminary data to further investigate the role of miRNAs in the diagnosis and therapeutic targets of human diabetic complications and support future broader longitudinal studies to better substantiate the role of dysregulated miRNAs as potential biomarkers and therapeutic targets of diabetic complications.
Insights
MicroRNAs (miRNAs) are implicated in diabetic complications. This review identifies differentially expressed miRNAs and their targets, highlighting their potential as diagnostic and therapeutic biomarkers for conditions like diabetic nephropathy, retinopathy, neuropathy, and cardiopathy.
Area of Science:
- Endocrinology and Metabolism
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) regulate gene expression and are crucial in the pathogenesis of diabetic complications.
- Diabetic complications include diabetic nephropathy (DN), diabetic retinopathy (DR), diabetic neuropathy (DNP), and diabetic cardiopathy (DC).
Purpose of the Study:
- To investigate microRNA expression patterns in diabetic nephropathy, retinopathy, neuropathy, and cardiopathy.
- To identify potential microRNA biomarkers for diabetic complications.
Main Methods:
- Systematic review adhering to PRISMA guidelines.
- Literature search across PubMed, Embase, and Web of Science databases.
- Pathway enrichment analysis using miRPath (DIANA) and target gene prediction with DIANA microT-CDS and TargetScan.
Main Results:
- 71 studies were selected, revealing 79 differentially expressed miRNAs across diabetic complications.
- miRNA126 and miRNA192 were among the frequently reported miRNAs.
- 156 target genes and 103 KEGG pathways were identified.
Conclusions:
- Dysregulated miRNAs show potential as circulating biomarkers for diabetic complications.
- Further research and longitudinal studies are warranted to validate miRNAs as diagnostic and therapeutic targets.
- This review provides evidence for the role of miRNAs in the pathophysiology of diabetic complications.
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