Rationally designed Pyrazolo[1,5-a]pyrimidines as dual inhibitors of CA IX/XII and CDK6: A novel approach for NSCLC

Mahmoud S Elkotamy1, Islam A Elkelesh1, Simone Giovannuzzi2

  • 1Pharmaceutical Chemistry Department, Faculty of Pharmacy, Egyptian Russian University, Badr City, 11829, Cairo, Egypt.

Insights

Researchers developed novel dual-target inhibitors for non-small cell lung cancer (NSCLC). These compounds target carbonic anhydrase (CA) IX/XII and cyclin-dependent kinase 6 (CDK6), showing promising cytotoxicity and cell cycle arrest in NSCLC cells.

Area of Science:

  • Medicinal Chemistry
  • Oncology
  • Molecular Biology

Background:

  • Non-small cell lung cancer (NSCLC) remains a significant therapeutic challenge.
  • Targeting critical pathways like carbonic anhydrase (CA) isoforms IX/XII and cyclin-dependent kinase 6 (CDK6) offers potential for novel anticancer strategies.

Purpose of the Study:

  • To synthesize and evaluate novel pyrazolo[1,5-a]pyrimidine derivatives as dual-target inhibitors of CA IX/XII and CDK6 for NSCLC treatment.
  • To investigate the in-vitro anticancer activity, mechanism of action, and pharmacokinetic properties of these novel compounds.

Main Methods:

  • Molecular hybridization was employed to design and synthesize 16 pyrazolo[1,5-a]pyrimidine derivatives incorporating zinc-binding groups.
  • In-vitro assays included carbonic anhydrase inhibition, cytotoxicity against NSCLC cell lines (A549, NCI-H1734), kinase inhibition assays (CDK4, CDK6), cell cycle analysis, and apoptosis assays.
  • Molecular docking and in-silico ADMET predictions were performed to assess binding interactions and pharmacokinetic profiles.

Main Results:

  • Sulfonamide-containing derivatives showed potent inhibition of CA IX and CA XII, with specific compounds exhibiting nanomolar Ki values.
  • Compounds 7c, 7d, 7i, and 11d demonstrated superior cytotoxicity against NSCLC cell lines compared to Roscovitine.
  • Compounds 7d and 11d effectively inhibited CDK6 with IC50 values comparable to Palbociclib, inducing G1 cell cycle arrest and apoptosis.

Conclusions:

  • Compounds 7d and 11d are identified as promising dual-target inhibitors of CA IX/XII and CDK6 for NSCLC.
  • These agents exhibit favorable in-vitro efficacy and potential for favorable pharmacokinetics, warranting further investigation for NSCLC therapy.

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