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Data Science Orchestrator: A Containerized Trusted Research Environment for Flexible and Secure Analytical Pipelines
Jori Kern1,2,3,4,5,6, Markus Brechtel7,8, Philipp Kaluza9
1Federated Information Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Studies in Health Technology and Informatics
|May 17, 2025
Summary
The Data Science Orchestrator (DSO) enhances research reproducibility and data security by providing a turnkey solution for deploying analysis tools. It also supports federated analysis and automated reporting pipelines for broader research infrastructure needs.
Area of Science:
- Data Science
- Computational Research
- Research Infrastructure
Background:
- Researchers often use personal laptops with non-versioned datasets and unvetted software, risking data leaks and hindering result reproducibility.
- Current practices for data analysis are often slow, tedious, and lack robust security and version control.
Purpose of the Study:
- To introduce the Data Science Orchestrator (DSO) as a solution for secure and reproducible data analysis.
- To expand the DSO's capabilities to address broader research infrastructure needs beyond initial data analysis.
Main Methods:
- Development of the Data Science Orchestrator (DSO) as a turnkey solution for deploying analysis tools.
- Analysis of researcher requirements to identify needs for federated analysis and automated reporting pipelines.
- Implementation of automated analysis pipelines for repeated reporting at different intervals.
Main Results:
- The DSO provides a secure and reproducible environment for data analysis.
- The DSO's scope has been expanded to include federated data analysis capabilities.
- Automated analysis pipelines enable repeated reporting and extend the DSO's impact.
Conclusions:
- The Data Science Orchestrator significantly improves research safety, reproducibility, and efficiency.
- The expanded DSO addresses critical research infrastructure needs, supporting advanced data analysis and reporting.

