A Highly Sensitive and Selective DAMP Assay for the Detection of Bacterial Pathogens Associated With Brain

Liubov A Shkodenko1, Muhannad Ateiah1, Al-Abbass Mohamed1

  • 1Laboratory of DNA-Nanosensor Diagnostics, ITMO University, Lomonosova Street, 9, St Petersburg, Russia.

Bio-Protocol
|May 21, 2025
PubMed

Insights

Rapid point-of-care diagnosis of meningitis is now possible using a novel nucleic acid amplification test (NAAT). This dual-priming isothermal amplification (DAMP) assay accurately detects key bacterial pathogens without complex lab equipment.

Area of Science:

  • Microbiology
  • Molecular Diagnostics
  • Point-of-Care Testing

Background:

  • Early detection of meningitis pathogens like *Haemophilus influenzae*, *Neisseria meningitidis*, *Streptococcus pneumoniae*, and *Klebsiella pneumoniae* is crucial for patient outcomes.
  • Nucleic acid amplification testing (NAAT) offers high sensitivity and rapidity, making it suitable for point-of-care (POC) applications in diagnosing bacterial meningitis.

Purpose of the Study:

  • To develop an innovative, POC-compatible diagnostic assay for the rapid and accurate identification of bacterial meningitis pathogens.
  • To enable meningitis diagnosis without reliance on advanced laboratory infrastructure.

Main Methods:

  • Development of a dual-priming isothermal amplification (DAMP) assay utilizing custom internal primers for enhanced specificity.
  • Integration of Brilliant Green dye for sensitive fluorescence detection with a high sample-to-background ratio.
  • Validation of the assay's performance in a POC setting.

Main Results:

  • The DAMP assay demonstrated excellent specificity and sensitivity comparable to loop-mediated isothermal amplification (LAMP).
  • The assay successfully ensured the absence of false-positive results.
  • A high sample-to-background ratio was achieved using Brilliant Green for fluorescence detection.

Conclusions:

  • The developed DAMP-based assay provides a rapid, sensitive, and specific method for diagnosing bacterial meningitis at the point-of-care.
  • This innovative approach eliminates the need for sophisticated laboratory equipment, improving accessibility for early disease detection and management.

Related Concept Videos

Bacterial Meningitis01:24

Bacterial Meningitis

Bacterial meningitis is a severe infectious disease involving inflammation of the meninges, the protective membranes surrounding the brain and spinal cord. It occurs when pathogenic bacteria cross the blood–brain barrier and enter the cerebrospinal fluid. Common causative organisms include Neisseria meningitidis, Streptococcus pneumoniae, Haemophilus influenzae type b, Listeria monocytogenes, and Escherichia coli K1. The exact route of entry varies by pathogen and host condition.Routes of Entry...
Bacterial Meningitis I: Introduction01:22

Bacterial Meningitis I: Introduction

Bacterial meningitis is a severe, life-threatening inflammation of the meninges, particularly the pia mater and arachnoid mater, affecting the subarachnoid space, ventricles, and cerebrospinal fluid (CSF). If untreated, it can lead to significant neurological complications or death.Causative AgentsCommon pathogens vary with age and immune status. In adults, major organisms include Streptococcus pneumoniae, Neisseria meningitidis, and Haemophilus influenzae. Streptococcus agalactiae (group B...
Brain Abscess l: Introduction01:26

Brain Abscess l: Introduction

A brain abscess is a focal, intracerebral infection characterized by a localized collection of pus within the brain parenchyma, resulting from microbial invasion and the body’s inflammatory response. It progresses through stages: early and late cerebritis, followed by early and late capsule formation, reflecting tissue destruction, immune response, and eventual encapsulation.Etiology and PathogenesisCausative organisms vary with source and host factors, often involving polymicrobial infections,...