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Combining Clinical, Genetic and Protein Markers Using Machine Learning Models Discriminates Psoriatic Arthritis
Darshini Ganatra1, Max Kotlyar2, Amanda Dohey3
1Gladman Krembil Psoriatic Arthritis Program, Schroeder Arthritis Institute, Krembil Research Institute, Toronto, ON, Canada.
Diagnosing psoriatic arthritis (PsA) early is difficult. Combining clinical, genetic, and protein markers shows fair ability to distinguish PsA from psoriasis without arthritis (PsC).
Area of Science:
- Immunology
- Rheumatology
- Genetics
Background:
- Psoriatic arthritis (PsA) is an immune-mediated inflammatory condition affecting psoriasis patients.
- Early diagnosis of PsA is challenging, hindering timely treatment.
- Biomarker-based tests could improve early PsA detection.
Purpose of the Study:
- To identify clinical, genetic, and protein markers for distinguishing PsA from psoriasis without arthritis (PsC).
- To evaluate the combined diagnostic power of these markers using machine learning.
Main Methods:
- Collected demographic and clinical data from PsA and PsC patients.
- Genotyped 19 "PsA weighted" single-nucleotide polymorphisms (SNPs).
- Assessed 15 serum protein markers using ELISA and applied machine learning for discrimination.
Main Results:
- Clinical features alone had limited predictive value (AUC=0.607).
- SNP and protein panels showed moderate discrimination (AUCs ≈ 0.69).
- A combined model (Random Forest) integrating all markers achieved the best discrimination (AUC=0.733).
Conclusions:
- A combination of clinical, genetic, and protein markers offers fair diagnostic ability for PsA.
- Further research is needed to discover more effective diagnostic signatures for PsA.
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