Related Experiment Video
Updated: Sep 20, 2025

Detection of Homologous Recombination Intermediates via Proximity Ligation and Quantitative PCR in Saccharomyces cerevisiae
Published on: September 11, 2022
MePCE promotes homologous recombination through coordinating R-loop resolution at DNA double-stranded breaks
Sravan K Devanathan1, Yi-Ru Li2, Samantha B Shelton1
1Department of Molecular Biosciences, University of Texas at Austin, 2500 Speedway, Austin, TX 78712, USA.
MePCE protein regulates DNA repair by interacting with DNA double-stranded break (DSB) factors. Its depletion impairs homologous recombination repair and affects R-loop processing, explaining synthetic lethality with BRCA1 deficiency.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- MePCE protein regulates transcription elongation factor P-TEFb partitioning.
- Its role in chromatin function, particularly DNA repair, is not well understood.
- The 7SK ribonuclear protein complex (RNPc) involves MePCE and LARP7.
Purpose of the Study:
- To investigate the function of MePCE on chromatin, specifically in DNA double-stranded break (DSB) repair.
- To elucidate the interaction of MePCE with R-loop processing and DNA repair factors.
- To understand the role of MePCE in the context of 7SK RNPc dynamics at DSBs.
Main Methods:
- Investigated MePCE recruitment to DSBs.
- Assessed the impact of MePCE depletion on homologous recombination (HR) repair.
- Analyzed RAD51 loading and R-loop levels at DSBs.
- Examined interactions with R-loop processing factors and LARP7.
Main Results:
- MePCE is recruited to DSBs and interacts with DNA repair factors.
- MePCE depletion impairs HR, reduces RAD51 loading, and increases R-loop levels at DSBs.
- MePCE depletion alters LARP7 interaction with R-loops, leading to its degradation by BRCA1/BARD1.
- Dynamic regulation of 7SK RNPc at DSBs was uncovered.
Conclusions:
- MePCE plays a crucial role in DSB repair by homologous recombination.
- MePCE's function at DSBs involves R-loop processing and interaction with BRCA1/BARD1 pathway.
- These findings explain the synthetic lethality observed between MePCE and BRCA1 deficiency.
Related Concept Videos
Homologous Recombination
Mismatch Repair
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Fixing Double-strand Breaks
Restarting Stalled Replication Forks
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Crossing Over

