Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Modeling epithelial deformation and cell rearrangement in response to external forces during Zebrafish epiboly.

NPJ systems biology and applications·2026
Same author

EpicTope: predicting and validating non-disruptive epitope tagging sites.

Development (Cambridge, England)·2026
Same author

Advanced Catalysts for Olefin Synthesis: Copper(II) Quinoline-Fused Oxazolidines in Alcohol Dehydration.

The Journal of organic chemistry·2025
Same author

Rules of life at the interface of calcium signaling and mechanobiology.

APL bioengineering·2025
Same author

Acvr2b receptors transduce all BMP signaling in the zebrafish gastrula and restrict Fibrodysplasia Ossificans Progressiva ACVR1-R206H signaling in a dose-dependent manner.

bioRxiv : the preprint server for biology·2025
Same author

Oocyte polarity is established independently of the Balbiani body.

bioRxiv : the preprint server for biology·2025

Related Experiment Video

Updated: Sep 20, 2025

Author Spotlight: Strategies for Mounting Zebrafish Embryos for High-Resolution Multiview Light-Sheet Microscopy — Techniques for Imaging and Image Reconstruction
08:33

Author Spotlight: Strategies for Mounting Zebrafish Embryos for High-Resolution Multiview Light-Sheet Microscopy — Techniques for Imaging and Image Reconstruction

Published on: July 19, 2024

944

Quantitative Staging of Mid-blastula Zebrafish Embryos by Nuclei Counting.

William D Jones1, Mary C Mullins2

  • 1Department of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

Methods in Molecular Biology (Clifton, N.J.)
|May 26, 2025
PubMed
Summary

Accurate staging of zebrafish embryos during development is crucial for experimental validity. This study introduces a quantitative cell-counting method to precisely stage embryos during the mid-blastula transition, enhancing experimental rigor.

Keywords:
Cell countingDevelopmental stagingMid-blastula transitionProteomicsRNA-seqZebrafishZygotic genome activation

More Related Videos

Observing Mitotic Division and Dynamics in a Live Zebrafish Embryo
10:10

Observing Mitotic Division and Dynamics in a Live Zebrafish Embryo

Published on: July 15, 2016

12.2K
Genotyping and Quantification of In Situ Hybridization Staining in Zebrafish
05:41

Genotyping and Quantification of In Situ Hybridization Staining in Zebrafish

Published on: January 28, 2020

9.9K

Related Experiment Videos

Last Updated: Sep 20, 2025

Author Spotlight: Strategies for Mounting Zebrafish Embryos for High-Resolution Multiview Light-Sheet Microscopy — Techniques for Imaging and Image Reconstruction
08:33

Author Spotlight: Strategies for Mounting Zebrafish Embryos for High-Resolution Multiview Light-Sheet Microscopy — Techniques for Imaging and Image Reconstruction

Published on: July 19, 2024

944
Observing Mitotic Division and Dynamics in a Live Zebrafish Embryo
10:10

Observing Mitotic Division and Dynamics in a Live Zebrafish Embryo

Published on: July 15, 2016

12.2K
Genotyping and Quantification of In Situ Hybridization Staining in Zebrafish
05:41

Genotyping and Quantification of In Situ Hybridization Staining in Zebrafish

Published on: January 28, 2020

9.9K

Area of Science:

  • Developmental Biology
  • Zebrafish Embryology
  • Molecular Biology

Background:

  • Precise developmental staging is critical for comparing experimental groups in developmental biology.
  • Zebrafish embryos undergo rapid transcriptional changes at the mid-blastula transition, complicating staging by morphology or timing alone.
  • Accurate staging ensures observed gene or protein expression changes are due to experimental variables, not developmental asynchrony.

Purpose of the Study:

  • To present a quantitative method for staging zebrafish embryos during the mid-blastula transition.
  • To improve the accuracy and reduce variability in zebrafish developmental experiments.
  • To provide a reliable staging technique applicable to various experimental conditions.

Main Methods:

  • Developed a quantitative staging method based on cell counting during the mid-blastula period.
  • Applied the method to sibling zebrafish embryos by staining nuclei with a marker.
  • Imaged and counted nuclei using confocal microscopy and standard imaging software.

Main Results:

  • The cell count method provides precise staging of zebrafish embryos during the mid-blastula transition.
  • This quantitative approach overcomes limitations of morphological or timing-based staging.
  • The method is applicable to any zebrafish experiment during this critical developmental window.

Conclusions:

  • Quantitative staging based on cell count enhances experimental rigor in zebrafish studies.
  • This method effectively reduces variability caused by developmental asynchrony.
  • The technique offers a reliable solution for accurate staging during the mid-blastula period.