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Updated: Sep 20, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Influence of oral and skin microbiota on multiple sclerosis risk and severity: A mendelian randomization analysis
Valeria Zancan1, Martina Nasello1, Selene Diamant1
1Department of Neurosciences, Mental Health and Sensory Organs, Sapienza University of Rome, Rome, Italy.
Abstract:
Recent research on the impact of gut microbiota on multiple sclerosis (MS) has been extensive; however, the role of microbial composition in other body interfaces, such as the mouth and the skin, has received much less attention. In a first step towards addressing this gap, we used Mendelian Randomization (MR), an analytical approach using genetic variants as proxies for environmental exposures to estimate the causal relationship between a risk factor and an outcome. Here, we performed a two-sample MR analysis to assess the link between oral and skin microbiome composition and both MS risk and severity. Exposure data were extracted from summary statistics of two large genome-wide association studies (GWAS) assessing the influence of host genetics on the microbiome composition of the oral cavity and skin. Outcome data derived from the largest GWAS on MS susceptibility and the recent GWAS on MS severity. After stringent instrumental variant selection, we applied inverse-variance-weighted (IVW) and Wald's ratio as primary MR methods, MR EGGER to control for horizontal pleiotropy, and checked directionality through Steiger's test. We found that the relative abundance of Veillonella genus in the skin may enhance MS risk, while no significant association between oral composition and MS susceptibility emerged. Furthermore, we found the Gammaproteobacteria class in the skin is associated with MS severity. We also identified suggestive, protective signals from different oral microbial strains (Bacilli class, Porphyromonas genus, Proteobacteria phylum and Veillonella dispar species). Overall, our findings provide preliminary evidence supporting the hypothesis that skin microbiota might contribute to MS risk, and both oral and skin microbial composition could affect disease severity, broadening the relevance of dysbiosis beyond the gut in MS etiopathogenesis.
Insights
The skin microbiome, specifically the Veillonella genus, may increase multiple sclerosis (MS) risk. Skin and oral microbes also appear to influence MS severity, suggesting broader roles for dysbiosis beyond the gut.
Area of Science:
- Microbiome Research
- Neuroimmunology
- Human Genetics
Background:
- Extensive research links gut microbiota to multiple sclerosis (MS).
- The role of oral and skin microbiomes in MS pathogenesis remains under-investigated.
- Understanding extragut microbial contributions is crucial for a comprehensive view of MS.
Purpose of the Study:
- To investigate the causal relationship between oral and skin microbiome composition and MS risk.
- To assess the association between oral and skin microbial communities and MS severity.
- To explore the potential role of extragut dysbiosis in MS etiology.
Main Methods:
- Two-sample Mendelian Randomization (MR) analysis utilizing large genome-wide association study (GWAS) summary statistics.
- Exposure data from GWAS on oral and skin microbiome composition.
- Outcome data from GWAS on MS susceptibility and severity; primary analysis using inverse-variance-weighted (IVW) and Wald's ratio, with MR-Egger for pleiotropy assessment.
Main Results:
- The relative abundance of the skin bacterium *Veillonella* genus showed a potential association with increased MS risk.
- Skin microbiota, specifically the Gammaproteobacteria class, was associated with MS severity.
- Suggestive protective associations were observed for oral microbes including Bacilli class, *Porphyromonas* genus, Proteobacteria phylum, and *Veillonella dispar*.
Conclusions:
- Skin microbiota composition may contribute to the risk of developing multiple sclerosis.
- Both oral and skin microbial communities appear to influence MS disease severity.
- Findings broaden the understanding of microbial dysbiosis in MS, extending beyond the gut.
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