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Updated: Sep 20, 2025

Rab10 Phosphorylation Detection by LRRK2 Activity Using SDS-PAGE with a Phosphate-binding Tag
Published on: December 14, 2017
LRRK2 interactions with microtubules are independent of LRRK2-mediated Rab phosphorylation
Tuyana Malankhanova1, Zhiyong Liu1, Enquan Xu1
1Duke Center for Neurodegeneration Research, Department of Pharmacology and Cancer Biology, Duke University, Durham, NC, USA.
Abstract:
Deregulated microtubules are common defects associated with neurodegenerative diseases. Recent cryo-electron microscopy studies in cell lines overexpressing Parkinson's disease-associated LRRK2 suggest microtubule surfaces may regulate kinase activity by stabilizing different LRRK2 conformations. In macrophages with high endogenous LRRK2 expression, we find that nocodazole treatment destabilizes microtubules and impairs LRRK2-mediated Rab phosphorylation. GTP supplementation restores nocodazole-reduced Rab phosphorylation, linking LRRK2 kinase action to cellular GTP levels. Chemical microtubule stabilization, and kinetically trapping LRRK2 to microtubule surfaces, has negligible effects on Rab phosphorylation. In contrast, trapping LRRK2 to LAMP1-positive membranes upregulates LRRK2-mediated Rab phosphorylation. Proximity-labeling proteomics and colocalization studies show that LRRK2 robustly interacts with both polymerized and free tubulin transiently and independently of LRRK2 kinase activity. Endogenous LRRK2 complexed with type I inhibitors in neurons and macrophages fails to stably interact with microtubules, whereas bulky N-terminal tags fused to LRRK2 promotes stable microtubule binding in cell lines. Collectively, these results show that tubulin isoforms and microtubules are transient LRRK2-interacting proteins non-essential for LRRK2-mediated Rab phosphorylation.
Insights
Microtubules do not directly regulate Parkinson's disease-associated LRRK2 kinase activity. Tubulin and microtubules are transient LRRK2 interactors, not essential for Rab phosphorylation.
Area of Science:
- Neuroscience
- Cell Biology
- Biochemistry
Background:
- Microtubule dysfunction is implicated in neurodegenerative diseases.
- Parkinson's disease-associated Leucine-rich repeat kinase 2 (LRRK2) is a key protein in neuronal health.
- Previous studies suggest microtubule interactions may influence LRRK2 kinase activity.
Purpose of the Study:
- To investigate the direct role of microtubules and tubulin in regulating LRRK2 kinase activity and function.
- To determine if LRRK2 interacts with microtubules in endogenous systems.
Main Methods:
- Utilized nocodazole to destabilize microtubules in macrophages with endogenous LRRK2.
- Assessed LRRK2-mediated Rab phosphorylation following microtubule disruption and GTP supplementation.
- Employed chemical microtubule stabilization and LRRK2 trapping to membranes.
- Conducted proximity-labeling proteomics and colocalization studies.
- Investigated LRRK2 interaction with microtubules using type I inhibitors and N-terminal tags.
Main Results:
- Nocodazole treatment destabilized microtubules and impaired LRRK2-mediated Rab phosphorylation, which was restored by GTP.
- Chemical microtubule stabilization had minimal impact on Rab phosphorylation.
- Trapping LRRK2 to LAMP1-positive membranes upregulated Rab phosphorylation.
- LRRK2 transiently and independently interacted with both polymerized and free tubulin.
- Inhibitor-bound LRRK2 did not stably interact with microtubules, unlike tagged LRRK2.
Conclusions:
- Tubulin and microtubules are transient interacting partners of LRRK2.
- Microtubule binding is not essential for LRRK2-mediated Rab phosphorylation.
- Cellular GTP levels, rather than direct microtubule interaction, appear to influence LRRK2 activity.
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