Related Experiment Video
Updated: Jun 13, 2025

Uracil-DNA Glycosylase Assay by Matrix-assisted Laser Desorption/Ionization Time-of-flight Mass Spectrometry Analysis
Published on: April 22, 2022
Efficient photodeactivation mechanism in an unnatural nucleic acid base
Somsuta Ray1, Debashree Ghosh1
1School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India. pcdg@iacs.res.in.
None:
5-aza-7-deazaguanine (5N7C-G), also known as P, is an unnatural nucleic acid base (NAB) closely related in structure to the natural NAB guanine. It forms a Watson-Crick base pair with the unnatural NAB Z synthesized by Benner and co-workers. We study the ultrafast decay pathways for this modified NAB with high-level multireference methods. We observe from both static and dynamic studies that there are multiple deactivation channels with significant differences in energetics and, therefore, timescales. The nonradiative deactivation mechanisms at sub-picosecond timescales are remarkably similar to those of the natural NAB guanine. These findings explain the experimental observations of Krul et al. [Krul et al., Photochem. Photobiol., 2023, 99, 693-705].
Related Concept Videos
Overview of DNA Repair
Chemically...
DNA Base Pairing
Nucleotide Excision Repair
Base Excision Repair
The first step of...
Proofreading
Maxam-Gilbert Sequencing
Challenges of the Maxam-Gilbert Method
The...

