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Updated: Sep 20, 2025

Determining Genome-wide Transcript Decay Rates in Proliferating and Quiescent Human Fibroblasts
Published on: January 2, 2018
Human CCR4 deadenylase homolog Angel1 is a non-stop mRNA decay factor
Tim Nicholson-Shaw1, Megan E Dowdle1, Yasmeen Ajaj1
1Division of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA.
Abstract:
Translation elongation stalls trigger mRNA decay and degradation of the nascent polypeptide via translation-dependent quality control pathways. One such pathway, non-stop mRNA decay (NSD), targets aberrant mRNAs that lack stop codons, for example, due to premature polyadenylation. Here we identify Angel1, a CCR4 deadenylase homolog whose biochemical activity remains poorly defined, as a rate-limiting factor for NSD in human cells. Angel1 associates with mRNA coding regions and proteins involved in ribosome-associated quality control and mRNA decay, consistent with a factor that monitors translation elongation stalls. Depletion of Angel1 causes stabilization of reporter mRNAs that are targeted for NSD by the absence of stop codons, but not an mRNA targeted for nonsense-mediated decay. A conserved catalytic residue of Angel1 is critical for its function in NSD. Our findings identify Angel1 as a human NSD factor and suggest that Angel1 catalytic activity plays a critical role in the NSD pathway.
Insights
Angel1 is identified as a key factor in non-stop mRNA decay (NSD), a pathway that degrades faulty mRNAs lacking stop codons. Its catalytic activity is crucial for this essential cellular process.
Area of Science:
- Molecular Biology
- RNA Biology
- Cellular Quality Control
Background:
- Translation elongation stalls trigger mRNA decay and nascent polypeptide degradation through quality control pathways.
- Non-stop mRNA decay (NSD) specifically targets aberrant mRNAs lacking stop codons, often due to premature polyadenylation.
Purpose of the Study:
- To identify novel factors involved in the non-stop mRNA decay (NSD) pathway in human cells.
- To elucidate the biochemical role and mechanism of Angel1 in NSD.
Main Methods:
- Biochemical assays to define the activity of Angel1, a CCR4 deadenylase homolog.
- Cellular depletion studies using reporter mRNAs to assess Angel1's function in NSD.
- Analysis of Angel1's association with mRNA and relevant protein complexes.
Main Results:
- Angel1 was identified as a rate-limiting factor for NSD in human cells.
- Angel1 associates with mRNA coding regions and proteins involved in ribosome-associated quality control and mRNA decay.
- Depletion of Angel1 stabilizes reporter mRNAs targeted for NSD, while a conserved catalytic residue is critical for its function.
Conclusions:
- Angel1 is a novel human factor essential for the non-stop mRNA decay (NSD) pathway.
- The catalytic activity of Angel1 plays a critical role in recognizing and processing non-stop mRNAs.
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