Human CCR4 deadenylase homolog Angel1 is a non-stop mRNA decay factor

Tim Nicholson-Shaw1, Megan E Dowdle1, Yasmeen Ajaj1

  • 1Division of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA.

RNA (New York, N.Y.)
|May 29, 2025
PubMed

Insights

Angel1 is identified as a key factor in non-stop mRNA decay (NSD), a pathway that degrades faulty mRNAs lacking stop codons. Its catalytic activity is crucial for this essential cellular process.

Area of Science:

  • Molecular Biology
  • RNA Biology
  • Cellular Quality Control

Background:

  • Translation elongation stalls trigger mRNA decay and nascent polypeptide degradation through quality control pathways.
  • Non-stop mRNA decay (NSD) specifically targets aberrant mRNAs lacking stop codons, often due to premature polyadenylation.

Purpose of the Study:

  • To identify novel factors involved in the non-stop mRNA decay (NSD) pathway in human cells.
  • To elucidate the biochemical role and mechanism of Angel1 in NSD.

Main Methods:

  • Biochemical assays to define the activity of Angel1, a CCR4 deadenylase homolog.
  • Cellular depletion studies using reporter mRNAs to assess Angel1's function in NSD.
  • Analysis of Angel1's association with mRNA and relevant protein complexes.

Main Results:

  • Angel1 was identified as a rate-limiting factor for NSD in human cells.
  • Angel1 associates with mRNA coding regions and proteins involved in ribosome-associated quality control and mRNA decay.
  • Depletion of Angel1 stabilizes reporter mRNAs targeted for NSD, while a conserved catalytic residue is critical for its function.

Conclusions:

  • Angel1 is a novel human factor essential for the non-stop mRNA decay (NSD) pathway.
  • The catalytic activity of Angel1 plays a critical role in recognizing and processing non-stop mRNAs.

Related Concept Videos

Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
10.9K
mRNA Stability and Gene Expression02:51

mRNA Stability and Gene Expression

The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
5.8K
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
7.9K
RNA Editing02:23

RNA Editing

RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.2K
RNA Stability01:53

RNA Stability

Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
34.0K
Chromatin Structure Regulates pre-mRNA Processing02:41

Chromatin Structure Regulates pre-mRNA Processing

In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
7.2K