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Updated: Jun 16, 2025

Combined DNA-RNA Fluorescent In situ Hybridization FISH to Study X Chromosome Inactivation in Differentiated Female Mouse Embryonic Stem Cells
Published on: June 14, 2014
Ubinuclein 2 is essential for mouse development and functions in X chromosome inactivation
Asun Monfort1, Giulio Di Minin1, Sarah Sting1
1Institute of Molecular Health Sciences, Swiss Federal Institute of Technology, Zurich, Switzerland.
The HIRA complex is crucial for gene regulation in mice, particularly in female X-chromosome inactivation. Mutations in Ubn1 and Ubn2 genes disrupt this process, leading to developmental issues and impacting gene silencing.
Area of Science:
- Epigenetics
- Developmental Biology
- Genetics
Background:
- The Histone Regulator A (HIRA) complex deposits histone H3.3 independently of DNA replication.
- The precise role of the HIRA complex in gene regulation, especially during mammalian development, requires further elucidation.
- Understanding the HIRA complex's function is key to comprehending epigenetic mechanisms governing gene expression.
Purpose of the Study:
- To investigate the in vivo functions of the HIRA complex, specifically the genes Ubn1 and Ubn2, in mouse development and gene regulation.
- To determine the mechanistic link between HIRA complex function and X-chromosome inactivation.
- To identify the earliest molecular events affected by HIRA complex mutations during X inactivation initiation.
Main Methods:
- Analysis of Ubn1 and Ubn2 gene mutations in mice, including viability, fertility, and embryonic development assessments.
- Examination of combined Ubn1 and Ubn2 mutations to assess synergistic effects on embryonic lethality and development.
- Molecular analysis of mouse embryonic stem cells with mutations in Ubn1, Ubn2, and Hira to study X inactivation initiation and Xist-mediated gene silencing.
Main Results:
- Ubn1 mutant mice are viable and fertile, while Ubn2 mutations cause embryonic lethality with a male-biased sex ratio.
- Combined Ubn1 and Ubn2 mutations lead to complete embryonic lethality and developmental arrest, with a notable reduction in female embryos.
- Mutations in Ubn1, Ubn2, and Hira impair Xist-mediated gene silencing, with the earliest defect being the failure to establish histone H3 tri-methylation on X-linked genes.
Conclusions:
- The HIRA complex plays a critical, sex-specific role in the initiation of X-chromosome inactivation in female mice.
- Loss of Ubinucleins (Ubn1/Ubn2) disrupts the normal epigenetic switch from histone H3 acetylation to tri-methylation on X-linked genes during X inactivation.
- These findings reveal a novel function of the HIRA complex in establishing repressive histone marks essential for developmental gene silencing.
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