Related Experiment Video
Updated: Sep 19, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Expanding implementation of pediatric whole-genome sequencing: Insights from SeqFirst providers to inform equitable
Joon-Ho Yu1, Katherine E MacDuffie2, Olivia Sommerland3
1University of Washington, Department of Pediatrics, Division of Genetic Medicine, Seattle, WA, USA; University of Washington, Institute for Public Health Genetics, Seattle, WA USA; Department of Pediatrics, Division of Bioethics and Palliative Care, University of Washington, Seattle, WA, USA; Seattle Children's Hospital and Research Institute, Seattle, WA, USA.
Insights
Whole-genome sequencing (WGS) provides a direct path to precise genetic diagnoses for rare childhood conditions. However, provider perceptions of families can delay WGS access, impacting equitable healthcare delivery.
Area of Science:
- Genetics
- Pediatrics
- Healthcare Access
Background:
- Whole-genome sequencing (WGS) is a powerful diagnostic tool for rare genetic conditions in children.
- Equitable access to genetic services, including WGS, is limited by various structural and social factors.
- Disparities in access can stem from interactions between families, healthcare providers, and institutions.
Purpose of the Study:
- To identify barriers and inform strategies for improving equitable access to precise genetic diagnoses (PrGD) through WGS.
- To understand the perspectives of neonatologists and neurodevelopmental (NDV) providers regarding WGS implementation.
- To explore how provider perceptions influence the introduction of WGS to families.
Main Methods:
- Conducted semi-structured key informant interviews with 19 neonatologists and NDV providers.
- Interviewees were involved in referring families to the SeqFirst study for WGS.
- Qualitative data analysis to identify themes related to WGS access barriers.
Main Results:
- Providers expressed enthusiasm for offering WGS despite varying medical contexts.
- Key considerations influencing WGS introduction included perceptions of family capacity, readiness, and trust.
- Provider-family rapport was also a significant factor in the timing and delivery of genetic testing information.
- Findings suggest that providers' perceptions of families may lead to delayed WGS implementation.
Conclusions:
- Provider perceptions of families and their social contexts present challenges and opportunities for WGS implementation.
- Strategies are needed to promote and maximize equitable access to WGS for all children needing a precise genetic diagnosis.
- Addressing provider biases and improving provider-family interactions are crucial for equitable WGS delivery.
Abstract:
Whole-genome sequencing (WGS) as a diagnostic test offers children suspected of having a rare genetic condition and their families the best direct path toward securing a precise genetic diagnosis (PrGD). Yet, a limited supply and inequitable access to genetic services are impediments to realizing the benefits of a PrGD. Such access disparities might be due to a range of structural and social determinants that manifest in interactions, or the lack thereof, between families, providers, and institutions. Semi-structured key informant interviews (n = 19) were conducted with neonatologists and neurodevelopmental clinic providers (NDV providers) who referred families to the SeqFirst study to identify barriers and inform strategies to improve equitable access to a PrGD via WGS. Overall, neonatologists and NDV providers were enthusiastic about offering WGS to their patients and families despite different contexts of medical care. Providers cited several considerations that influenced their introduction of WGS and genetic testing to families, including their perceptions of families' capacity, readiness, and distrust and the establishment of sufficient provider-family rapport. These considerations influenced providers' timing and introduction of genetic testing and WGS to families. Together, these findings suggest that providers' perceptions of families may result in delayed introduction of WGS. Despite enthusiasm for early WGS across medical subspecialties, providers' perceptions of families and their social contexts highlight both challenges and opportunities in the implementation of WGS to promote and maximize equitable access.
More Related Videos
Related Concept Videos
Next-generation Sequencing
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
Genomics
Sanger Sequencing
Maxam-Gilbert Sequencing
Challenges of the Maxam-Gilbert Method
The...
RNA-seq
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...

