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The Use of Chemostats in Microbial Systems Biology
Published on: October 14, 2013
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Temperature adaptability drives functional diversity and horizontal gene transfer within microbial communities in
Yi Luo1, Hui Liao1, Liming Wu2
1The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, PR China.
Bioresource Technology
|June 5, 2025
Summary
High-temperature Daqu (HTD) fermentation involves temperature-dependent microbial changes influencing flavor and efficiency. Temperature stress drives gene transfer, impacting microbial domestication and HTD quality.
Area of Science:
- Microbiology
- Fermentation Science
- Food Science
Background:
- High-temperature Daqu (HTD) solid-state fermentation is crucial for efficient fermentation but its temperature-dependent microbial dynamics remain unclear.
- Understanding microbial assembly, domestication, and metabolic profiles under varying temperatures is essential for optimizing HTD production.
Purpose of the Study:
- To investigate the impact of temperature adaptability on microbial communities, flavor profiles, and metabolic networks in three distinct HTDs.
- To analyze horizontal gene transfer (HGT) events and their association with temperature adaptation and flavor metabolism in HTD.
Main Methods:
- Analysis of volatile compounds, microbial community structure (bacteria and fungi), metabolic networks, and HGT events using MetaCHIP.
- Comparative analysis of three HTDs (Renshu, Jiushang, Maoyuan) to identify correlations between microbial traits, flavor, and sample proximity.
Main Results:
- Identified 125 volatile compounds, with specific pyrazines, acids, and alcohols as key flavor substances.
- Revealed shared dominant bacterial genera (Bacillus, Kroppenstedtia) and fungal genera (Paecilomyces, Aspergillus, Rasamsonia, Lichtheimia).
- Demonstrated strong correlations between flavor metabolism, microbial structure, and HGT events with sample phylogenetic distance, with HGT linked to high-temperature adaptability and characteristic flavor.
Conclusions:
- Temperature stress significantly shapes microbial regulation and adaptive gene transfer in stacked fermented HTDs.
- Microbial structural and functional traits converge with decreasing sample proximity, indicating localized adaptation.
- Findings offer critical insights for HTD quality classification and optimizing solid-state fermentation efficiency through microbial domestication.
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