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Updated: Sep 19, 2025

Assessing the Viability of a Synthetic Bacterial Consortium on the In Vitro Gut Host-microbe Interface
Published on: July 4, 2018
Probiotic bacteria from asymptomatic necrotic tooth can regulate the microbiome homeostasis
Arya Adiningrat1, Ikhsan Maulana2, Ahmad Ghitha Fadhlurrahman2
1Department of Oral Biology and Biomedical Sciences, Faculty of Dentistry, Universitas Muhammadiyah Yogyakarta, Indonesia; Molecular Medicine and Therapy Laboratory, Research and Innovation Centre, Universitas Muhammadiyah Yogyakarta, Jl. Brawijaya, Geblagan, Tamantirto, Kec. Kasihan, Kabupaten Bantul, Daerah Istimewa, 55183, Yogyakarta, Indonesia.
A root canal bacterium, Lacticaseibacillus paracasei, was isolated and its cell-free supernatant showed potential postbiotic effects. This supernatant disrupted biofilms of Streptococcus mutans and Enterococcus faecalis, aiding in microbiome homeostasis.
Area of Science:
- Microbiology
- Endodontics
- Biotechnology
Background:
- Chronic asymptomatic necrotic root canals harbor complex microbial communities.
- Maintaining root canal microbiome homeostasis is crucial for treatment success.
- The role of specific bacteria and their products in this environment is not fully understood.
Purpose of the Study:
- To identify and isolate dominant bacteria from chronic asymptomatic necrotic root canals.
- To investigate the in vitro postbiotic potential of isolated bacteria to maintain root canal microbiome homeostasis.
- To evaluate the antibiofilm effects of bacterial cell-free supernatant (CFS) against pathogenic bacteria.
Main Methods:
- Metagenomic analysis and single colony isolation for bacterial identification.
- Cultivation of Lacticaseibacillus paracasei and preparation of cell-free supernatant (CFS).
- In vitro biofilm analysis against Streptococcus mutans and Enterococcus faecalis using crystal violet staining and microscopy (SEM).
Main Results:
- The dominant isolated bacterium was identified as Lacticaseibacillus paracasei.
- L. paracasei produced biofilm mass comparable to Enterococcus faecalis.
- The CFS of L. paracasei demonstrated significant disruptive effects on S. mutans and E. faecalis biofilms.
Conclusions:
- Lacticaseibacillus paracasei isolated from necrotic root canals produces postbiotic products.
- These postbiotics effectively disrupt the biofilm integrity of key oral pathogens, S. mutans and E. faecalis.
- This suggests a potential therapeutic role for L. paracasei-derived postbiotics in managing root canal infections.
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