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Bias01:22

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Bias refers to any tendency that prevents a question from being considered unprejudiced. In research, bias occurs when one outcome or answer is selected or encouraged over others in sampling or testing. Bias can occur during any research phase, including study design, data collection, analysis, and publication.
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Cruise control systems in cars are designed as multi-input systems to maintain a driver's desired speed while compensating for external disturbances such as changes in terrain. The block diagram for a cruise control system typically includes two main inputs: the desired speed set by the driver and any external disturbances, such as the incline of the road. By adjusting the engine throttle, the system maintains the vehicle's speed as close to the desired value as possible.
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Tailoring task arithmetic to address bias in models trained on multi-institutional datasets.

Xiruo Ding1, Zhecheng Sheng2, Brian Hur1

  • 1Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, USA.

Journal of Biomedical Informatics
|June 10, 2025
PubMed
Summary

Deep learning models can exhibit bias from data source, known as confounding by provenance. New methods, TAPER and DAPPER, use task arithmetic to reduce this bias in natural language processing models.

Keywords:
Confounding shiftLarge language modelsLow-rank adaptation (LoRA)Multi-institutional datasetsRobustnessTask arithmetic

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Area of Science:

  • Artificial Intelligence
  • Machine Learning
  • Natural Language Processing

Background:

  • Multi-institutional datasets enhance machine learning model generalization but can introduce confounding by provenance bias.
  • Deep learning models may learn data source indicators rather than true pathology, leading to poor generalization.
  • Confounding by provenance is a significant concern in natural language processing due to pervasive linguistic indicators of data origin.

Purpose of the Study:

  • To evaluate the effectiveness of task arithmetic in mitigating confounding by provenance in deep learning models.
  • To propose novel model-agnostic methods for reducing provenance-related bias in natural language processing.
  • To extend the task vectors approach to address bias in composite clinical datasets.

Main Methods:

  • Representing trained deep network weights as task vectors for arithmetic composition.
  • Developing Task Arithmetic for Provenance Effect Reduction (TAPER) and Dominance-Aligned Polarized Provenance Effect Reduction (DAPPER).
  • Evaluating TAPER and DAPPER on RoBERTa and Llama-2 models across three datasets.

Main Results:

  • Task vector approaches (TAPER and DAPPER) improved model robustness to confounding by provenance.
  • Enhanced performance was observed at the extremes of distribution shift.
  • Both RoBERTa and Llama-2 models demonstrated improved generalization with the proposed methods.

Conclusions:

  • Adjusting for confounding by provenance is crucial, particularly in cases of extreme distribution shift.
  • TAPER and DAPPER offer efficient strategies for mitigating bias in deep learning models for NLP.
  • These methods provide a novel approach applicable to various biases in composite clinical data.