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Updated: Sep 19, 2025

Structural Information from Single-molecule FRET Experiments Using the Fast Nano-positioning System
Published on: February 9, 2017
The RNF/NQR redox pumps: a versatile system for energy transduction in bacteria and archaea
Wolfgang Buckel1, Ulrich Ermler2, Janet Vonck3
1Faculty of Biology, Philipps-Universität Marburg, Karl-von-Frisch-Straße 8, 35043, Marburg, Germany.
Rhodobacter nitrogen fixation (RNF) complexes and NADH:quinone oxidoreductase (NQR) are crucial bacterial redox enzymes. Their shared mechanism involves conformational coupling for energy conversion, making them potential antibiotic targets.
Area of Science:
- Biochemistry
- Microbiology
- Structural Biology
Background:
- The Na+-translocating ferredoxin:NAD+ oxidoreductase (RNF) and NADH:quinone oxidoreductase (NQR) are vital membrane-bound enzyme complexes.
- RNF is essential for anaerobic metabolism in various bacteria, while NQR evolved from RNF and is found in diverse bacterial groups.
- Neither RNF nor NQR are related to eukaryotic respiratory complex I, highlighting their unique biological roles.
Purpose of the Study:
- To compare the putative reaction mechanisms of RNF and NQR redox pumps.
- To investigate the shared functional module of RNF and NQR complexes in redox-driven cation transport.
- To explore the potential of RNF and NQR as novel antibiotic targets.
Main Methods:
- Comparative analysis of RNF and NQR structures and functions.
- Review of recent 3D structural data for RNF and NQR.
- Examination of electron transfer and cation translocation mechanisms.
Main Results:
- RNF and NQR share a core complex of four subunits essential for cation transport.
- Recent structural studies reveal conformational coupling between electron transfer and Na+ translocation in RNF/NQR.
- A common principle of energy conversion based on conformational coupling is proposed for both enzyme systems.
Conclusions:
- RNF and NQR represent a distinct family of redox-driven proton/sodium pumps.
- The conformational coupling mechanism is central to the function of RNF and NQR.
- RNF and NQR are promising targets for the development of new antibiotics.
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