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Updated: Sep 18, 2025

Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology
Published on: December 15, 2017
Neural network-ant-colony hybrid optimization of a bacterial fruit juice clarifying metallo-neutral-protease
Eloghosa Ikharia1, Maurice Ekpenyong1,2, David Ubi3
1Environmental Microbiology and Biotechnology Unit, Department of Microbiology, Faculty of Biological Sciences, University of Calabar, Calabar, Nigeria.
Abstract:
Neutral proteases are invaluable for food, pharmaceutical, and feed industries because of their mild catalysis. This study reports the production and potential food industry application of a neutral protease by a coastal sediment Bacillus cereus strain. An integrated approach involving response surface methodology (RSM) and artificial neural network-ant-colony hybrid optimization (ANN-ACO) was adopted to develop a suitable bioprocess medium for improved yield. The enzyme was purified, characterized for activity and stability to physicochemical parameters, and investigated for fruit juice clarification. The ANN-ACO model was observed to be superior (predicted r 2 = 98.5%, mean squared error [MSE] = 0.0353) to the RSM model (predicted r 2 = 86.4%, MSE = 23.85). It recommended a medium containing (gL- 1) molasses 45.00, urea 9.81, casein 25.45, Ca2+ 1.23, Zn2+ 0.021, Mn2+ 0.020, and 4.45% (vv- 1) inoculum, for a 6.75-fold increase in protease activity from 76.63 UmL- 1 in un-optimized medium. The 10.0-fold purified 46.6-kDa-enzyme had maximum activity at pH 6.5, 45-55ºC. The 353 amino acid protein had its HEXXH motif between 173 and 177 residues. Its substantial requirements for Zn2+ and Ca2+, and significant inhibition by EDTA confirmed its metallo-protease nature. Successful clarification of fruit juices underscores its biotechnological potential.
Supplementary Information:
The online version contains supplementary material available at 10.1007/s13197-024-06095-w.
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